Id Trinity | TRINITY_DN47809_c2_g1_i2 |
---|---|
Name Transcript | Ll_transcript_442456 |
Sequence | AAGCTAAACGTGTGTAAAAGCCATAAAGCTAAACGTGTGTAAAAGCCATAAAGCTAAACGTGTGTAAAAGCCACTCGCTTCTACTAGTGCCAGTGTCTTG TGTTAGTGTAGAGAAAACGTTTGAGAAAGAAACAAGCTTTATTCTCTCTTCAACCCTACACCGCCCAAGGTGAGAAAAAAGCAAAGTACCGCTTCTTCTT ATTCCTCTTTCTTTTTCGATTCTCATTTCTTTATCACATAAGATACGAATAATCAGAATAAGACCCTTCACTTTCACTTTTCCTTTTCTGTTCTCACACA CAATTAGGGTTTCTTTCGCTTTCAGATTGAACGAAAATGATCGATTTTTCTCGCGTTCAGAAGGAGCTTGTTGAATGCAGCAAAGATACTGAAGGATCAG GCATCAAAGTTACCCCGAAAAACGACAACCTTGTTCGTCTCAATGGAACCATTCCTGGCCCTACTGGAACTCCCTATGAAGGGGGTATTTTCCAAATTGA CATTACTATTCCAGATGGGTACCCGTTTGAGCCCCCAAAGATGCATTTTACAACCAAAGTTTGGCACCCTAATATCAGCAGCCAAAGTGGAGCTATTTGC CTAGACATATTAAAGGATCAGTGGAGCCCAGCACTCACTCTGAAGACTGCACTTCTTTCTGTGCAAGCACTTCTCTCTGCTCCCCAGCCTGATGATCCTC AAGATGCTGTTGTGGCACAGCAGTATCTGAAAGATTACCAGACATTTGTTAGCACTGCTCGTTACTGGACAGAAAGTTTTGCCAAGACATCTTCTCGCGG GGTTGAAGATAAGGTACAGAAACTTGTAGAGATGGGGTTCCCTGAAGCTCAAGTTAGGAGCGTTTTGGAAGCTGTTGGTGGTGATGAAAACTTGGCTCTT GAAAGGTTGCTGTAATCTATCTGGGAAATATCAACTAAAGTGTTTTGAGCATTGTTGGAACTATTTATAGACACAAAGGGTTAATTGCATATAAACTATG ATTTACTTGAGTCATATGGTATAGTATTTTTGTTGGATCCTGCCTTCTTTATTCTCTTTGGAATCTCTGGTAATCAACATTTTCCAAATGTTATAGAATG TATGGAATTAAATTAAATACCTTGTTGACAATGTTTGTGCTTCATGGATAAATTATTTGAGACAATGTTGATGGTTTTTTTGGAATAACCAA BLAST |
Tissue | pods |
Gene name | LI_gene_155677; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442456
Blastp | Ubiquitin-conjugating enzyme E2 27 from Arabidopsis with 78.01% of identity |
---|---|
Blastx | Ubiquitin-conjugating enzyme E2 27 from Arabidopsis with 78.01% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT5G50870) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430083.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |