Ll_transcript_442463

• Id Trinity: TRINITY_DN47809_c2_g1_i9
• Name Transcript: Ll_transcript_442463
• Sequence: TGGGTACCCGTTTGAGCCCCCAAAGATGCATTTTACAACCAAAGTTTGGTATGAAAATGTTTTGTCATGTTGGATTACAATTTGGTTAAGTTTGGTCATT GATGTGAGACTATATGGATCATTTGCTGAGTTTCCTTAAAGTTATTAATTTTATAAATTCTGTCTTCTATTTTGATGTATGGAAATCGAAAATGGAAGAA AGTATATGGTAATGTGGAAACTCAATGCACTATGTTGTTTGGCATGCTCTCTTTTTTCATGTTAATGTTTGTAGTATAAAACTAGGTTTTGAATTGTGGT TGCACTTGCAGTCATGGTTAGACTATAATCAGTATATTTACCGTGAGAAAATGCGGCCTTATGGGGCTTTAATTGCAGTGATATGGTTGTAGAGACTACC AAAGCCACCATATTAGTTGTGGTTGCAAATCACAATTTAAAACCTTGAGTGTAAGTAAATGTGCAATCCTAGAATATAGTCGGTGTTTGGATTGGAAGAT GAGGTCTTCTAAAACCAGTATGTTGTCCTTTATTCATGCATATTTTGCCAATTATTGGAAGGTTTTAAGCTAGGGTTCCATATGTTCCAATTTTATTGTT GATGTCACTGCAAGTTCATCTTAACTTGGTAAAGAGGTGTCGTATGTTGATCCTTTTCATAAAATAGAGCACGGTGGTGTAGCATTTCATCTCAACATTT CATGATATTATGAGTTCTGTATCTCATCTCATGTTGATATCCCCTTTTGCATGTTCTCCATATTAACCTTCCGAAGTGTATTTCTCATGCATAGCAAATT GTTGTATGATGTTTTCTTAAATTTGGAGAATCGAGTTATAATAATTGTTTGAAGAACACAGAGTCTGCATGTAACACGGGGTTTTAAATGACTTAGCATA AGTTGTTCTCGCTTCTGAAGATTCTTGTCATAATTGTGACTATTTTCTGTCTTAGGTTATAGAATGAGCAATTACCCATGTATAGAAAATTAAGAAATAT AGTATTTTATGCATTACTATGGCAAAATGTCTGTTAATTTTGTTCAGTTGATTAATGCATGGAATTTATCATTTATGTTATCCATTTAAGGCACCCTAAT ATCAGCAGCCAAAGTGGAGCTATTTGCCTAGACATATTAAAGGATCAGTGGAGCCCAGCACTCACTCTGAAGACTGCACTTCTTTCTGTGCAAGCACTTC TCTCTGCTCCCCAGCCTGATGATCCTCAAGATGCTGTTGTGGCACAGCAGTATCTGAAAGAGTATCAGACATTTGCTAGCACTGCTCGTTACTGGACGGA AAGTTTTGCGAAGACATCTTCTCGTGGGGTTGAAGATAAGGTACAGAAACTTGTAGAGATGGGGTTCCCCGAAGCTCAAGTAAGGAGCATTTTGGAAGCT GTTGGTGGTGATGAAAACTTGGCTCTTGAAAGGCTGCTGTAGTGTATCTGTGAAATATCAACTGAAGCGTTTTGAGCATGGGAAGTTGCTGGAACTATTT AGACACAAAGGATTAATTGCATATAAACTAATATGATTTACTTGAGCCATATCATATAGTATTTATGTTCTACCGTCTTCTTCTTTCTCCTCAGAATCTT CTGAGCTCAACGTTTTCCTCATGTTATAGCAGGTATGAAATTAATTACCTTATTGGCAAGGTTTCTGGTTCATGGATGAATTATTTATTTGAGACACTGC TTATAGTGTACTTAAGCTGGTTTACAGAAGTGTAACAAGGGAGTATAATTGAGAAAGGAAAATATGTTTTTGGTTTAGGAGGAAGTTTTCCTTAC
• Tissue: pods
• Gene name: LI_gene_155677;
• Additional information: details;

Expression of Ll_transcript_442463

FPKM

• PAB: 0.3
• PNAB: 0.8
• PS1: 2.7
• PS2: 0.5
• PS3: 0.6
• PW1: 3
• PW2: 1.4
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442463

• Blastp: Ubiquitin-conjugating enzyme E2 27 from Arabidopsis with 78.45% of identity
• Blastx: Ubiquitin-conjugating enzyme E2 27 from Arabidopsis with 79.13% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT5G50870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437182.1)
• Pfam: Ubiquitin-conjugating enzyme (PF00179.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;