Ll_transcript_442490

• Id Trinity: TRINITY_DN47811_c1_g1_i14
• Name Transcript: Ll_transcript_442490
• Sequence: CATAAATTGATTCGTTTGATTTGTACGTGGCTTAAAGGTTGGTAAAGCTCCTAACAAAATCACTAAAATAAGGGAAATAGTATAAATAAAAGCACTAGGA ATGTGTTCATAAATCATAATGAAGAGGTTGAGTAGTGTCTACGACAACATATTAAAGTGTAATGTTTTGATTTTATGAAAAAAGAGAACAACATATGAGG ACAAGTTGTGCACTAAAGTCAGTGTGTGTTTCTAGACTTTGGCTTTTAAGCAGTAAGATAAGCTTGGCTTCCCTCTAAAGAGTTGAGAAAAGATGAATGG TCCTTGTTAATTGTGCAAAGACAAGGCAATAGAGAGATTCAGCAATTGTAGCTGTAGTTTTAGTTGTGAAAGTTGAATATGACAAACATGACAACAATGA AGCTGGTTTTGGTGGCAGTTGGATTTGCATGCTTACTTTCTGGGGTTATTTCCTTTGGATCTGACACTCTCTCTATGCTTTCCTTCTTAGAAAATGGTGC TGTCTCAGTTTCTAGTACAAAGCCTTCTTCTTTACCCCAACCTGTCATGGTTGGCCTCACTCTTATTGAGGGAGCTGCTTCTACAGGAGCTGTGTGTCTG GATGGAACATTACCTGGTTACCATTTGGATCGTGGATTTGGATCCGGTGCAAATAGCTGGCTTGTTCATTTGGAGGGAGGAGGATGGTGTAATACCATTA GAAACTGTGTCTACCGAAAAACTAGTCGTCACGGTTCCTCAAATTATATGGAAAGTGAAATACCATTCACAGGAATATTGAGCAATAAAGCTGAAGAAAA CCCTGATTTCTTTAATTGGAACAGAGTCAAATTAAGGTACTGTGATGGGGCATCTTTCAGTGGCGATAGTCAAGATGAGTCTGCACAGCTTCAATTCCGA GGACAAAAGATATGGCTAGCTGCAATTGAGGAATTAATGTCCAAAGGAATGCAGAATGCTGAACAGGCCCTTCTCTCCGGATGCTCCGCGGGTGGTCTGG CGTCTATAATACATTGTGATGAGTTCCGGAACTCGTTTCCAGAATCTACCAAAGTTAAATGTTTGAGTGATGCAGGATTTTTTCTTGACGCAACTGATGT ATCTGGAGGCCGCACGCTGAGGAATCTGTTTGAAGGTGTAGTTCAGTTGCAGGTGGTATTTAATGTAGTTTTGTAGTAAAAAAATCTGAATAAGACTATA ATGTTAGTAGATTCTGGTTCTGACTTCTGGTCTTATAGAGGATTTGTAATATGTCAAAGATAAATCACTATCCTAATACTTAATACTTGAGTTATTAAAT GAGGGCATATGAATGATATTATATCTATAGCACAACCATAGAAATATATTAAGTGTTTTACTTCTTTGATGCATGGTTAAAAAAACCTGTACAAAGATGT TATGTAGCTGATGTTTTGAAAAGTGAAACTGTAGGAAGTACAAAAGAATTTGCCAACTAGTTGTCTCAACAAATTGGATCCCACTTCGGTAATTCTTATT CTCCATGTCATGCTATCCAAACTTGAAATACTTAAACATTCAAATATTAAACATGTGGTATATCTTTTTGCAGTGCTTCTTTCCTCAGAATATGGTTGAG CATGTTGAGACTCCATTGTTTATACTCAATGCGGCTTATGATTCATGGCAGGTTCAAGCCAGTTTAGCCCCACCTTCAGCTGACCCCTTTGGCTATTGGA ATGACTGCAAATCAAACCATGCAAATTGTAGCTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAGTTCAATTGCTAAATGACTTGAAAGACTTCTCAAG TTCATCTCAAACCGGGCTATTCATAAATTCTTGTTTTTCTCATTGCCAGTCTGAGAGACAAGGGACATGGTTTTCTGATGACTCTCCCCTTCTTCGGAAC ACGCCAATTGCAGTTGCTGTGGGAGACTGGTATTTTGATAGAAAAGATGTCAAAGCTATTGACTGTGCCTACCCCTGTGATAACACCTGTCATCATCTGG TTTTTAAGTGAGACAAATTTATTGTTTCCTGATATGGTAATATGATATTTAACCTTTCATCCTTGTAATTGTCATTTGTGCATTTAATATTCATTAATTG TTATGGAAAGAATGCTCTTGCATGAGGATGTAATGACAATTGCTTATCTATTTATTTTCACTGATAATAAGTCATGTCAATAATATTCATGTTTCCCCTT GCTAATTTTAGCTCATTAAAATATCTTCAATGATTTCAATATGTCCTGCACAAATGGTGTCCTGAACCATGCAATAATTCATTTTACACCCAAAGTGAGT TCCTCACTTGTGAGTAGTAGGGATGTTCTCTTTAACATTGAGATCCTATGTACAATGTACTTCAATGAAAAC
• Tissue: pods
• Gene name: LI_gene_155692;
• Additional information: details;

Expression of Ll_transcript_442490

FPKM

• PAB: 0.2
• PNAB: 1
• PS1: 0.7
• PS2: 1.7
• PS3: 1.8
• PW1: 1
• PW2: 1.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442490

• Blastp: Pectin acetylesterase 12 from Arabidopsis with 66.67% of identity
• Blastx: Pectin acetylesterase 6 from Arabidopsis with 65.48% of identity
• Eggnog: pectinacetylesterase(ENOG410XQKD)
• Kegg: Link to kegg annotations (AT3G05910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427884.1)
• Pfam: Pectinacetylesterase (PF03283.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;