| Id Trinity | TRINITY_DN47811_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_442478 |
| Sequence | CAAGATTCTGTATAGAGTGAGTAGTGAGATTCAGCTTTCAGCTTTTAGCTTTTAGCTTTTTGTTCTTGTTGTAAGCATTTTTGATTTCAGAAAGAAAGAG AAGAATGAAGAAGATGATTCTAGTGTTATTCATCTTACCCTTTGTTATCTCTGCTAGATCTGAGACTATAAACACAACACTCTCTCTCTTCTCTTTTTCT CAAAACGACGCCGTTCAATCTCAGCCTCTCACTATTCCTCTCACTCTTATTCAATCTGCTGCTTCCAAAGGAGCTGTTTGTTTGGATGGAACATTGCCTG GTTACCACTTTCATCCTGGATCTGGATCTGGTGCAAACAGTTGGCTCATTCAATTGGAGGGAGGAGGGTGGTGTAATACCATCAGAAGTTGTGTATATCG AAAAACTACTCGTCGCGGTTCCTCAAAGTTCATGGAAAAACAACTACCATTCACGGGGATATTGAGCAACAAAGCTGAAGAAAACCCTGATTTCTTTAAC TGGAATAGAATCAAAGTCCGATACTGTGATGGAGCATCTTTCAGCGGAGATAGTGAAAATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGT TAGCTGCAATGGACGAATTAATGTCAAAGGGGATGAACAAAGCCAATCAGGCCCTTCTCTCTGGATGCTCTGCAGGCGGTCTAGCATCTATAATACATTG TGACGAGTTCCGGAACTTGTTTCCACAGTCTACCAAAGTGAAATGTTTGAGTGATGCAGGATTTTTCCTTGATGCACTTGATGTATCTGGGGGGCGCACA CTGAAGAATCTGTTCGGAGGTGTAGTTAGCTTGCAGGAAGTGCAAAAAAATCTACCACAAAGCTGTGTTAGCAAACTGGACCCAACTTCGTGCTTCTTTC CTCAAAATTTGATCGACCATGTTCAGACACCATTGTTTCTACTCAATGCAGCTTATGATGCATGGCAGGTCCAGGAAAGTTTAGCCCCACCTTCAGCCGA TCCCCGTGGCTCATGGAATGAATGTAAATCGAATCATGCAAAATGTAACTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTAAATGAC GTGAAAGGCTTCTCGTCGTCATCTCAAACTGGATTGTTCATAAATTCGTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATAACT CTCCACTTATCAACAATAAGCCAGTAGCGCTTGCTGTTGGAGACTGGTATTTTGATCGAGAAGCTGTCAAAGCTATTGACTGTGCTTACCCCTGTGACTC CTCCTGTCATAATTTGGTCTTCAATGTTGGTAGATCCGTAATAGTAGACTCGAACTCTCAGCCCTCAAGTGATGAATCATTTAGCATGATATATTCCCAC TCCACAAAGTTGACTTATACAAGCCTATATATGCTAAGTGCTTTATTGTCAATTACATGTTCTTTGTGAACTATGGAGAATTTTAGGTCTCAACAGCACA TGCACTATGGGAGCTTTGTTTGTCCTTGTTCACTCTTCCATGTAAAAAATAGCCTGTAACTTCGTAGGTACTTTCCGCCTTTCAATCTATCGCCTGAAGG GCGCGAATCATGTTGTAACTTCAATCTATCGCCGAAGGGCGCGAATCATGTTGTAACTTCAATCTATCGCCGAAGGGCGCGAATCATGTTGTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_155692; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442478
| Blastp | Pectin acetylesterase 2 from Arabidopsis with 72.34% of identity |
|---|---|
| Blastx | Pectin acetylesterase 2 from Arabidopsis with 72.34% of identity |
| Eggnog | pectinacetylesterase(ENOG410XQKD) |
| Kegg | Link to kegg annotations (AT1G57590) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419017.1) |
| Pfam | Pectinacetylesterase (PF03283.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |