| Id Trinity | TRINITY_DN47827_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_441764 |
| Sequence | GGTCTTTCTAAATCATACGGAAATCCCTTTCACCCACGTCATTTTCTCCGCTCTCTCTTTTTCTTCTTCCCCTTCCATTCTCTCCTAACCATATATATTC GTACCCATTACAAGCCATTTTCTCCGTTTAGGTTTTCCTTCTTCTATTTCAATTCAGGATGAGTAATGAATATTTAAATCTCAAGGATGAAAGAGAATGT TCTGGAAAAGGGAAAAGGCTTTGGAAGAAGGTGAAGTATCAACTAGTTGAATACCACGCTTTACCTGGTTATTTGAGAGACAATGAATACATTCTAGCTC ATTATCGATCTGAATGGCCAATGAAGCAAGTTTTGCTCAGCATCTTCACAATTCATAATGAAACTCTCAATGTTTGGACGCATTTGATTGGGTTCTTCCT CTTTCTCGCTTTGACCATATACACTGCCATGCAAGTTCCAAAGGTTGTAGATCTTAACTCGCTACAGCATTTACCTGACATGCTAAAAAACGTCGACCTG CACAAATTACAATCAGAACTTTTACTGTGCCTCCCTTCATTGCCTGATTTTCACAGACTCAGGGAGGAATTAAGGACTACAATTCCATCAATCTCAAGTT GGCACGTAAAAGAACTTCTATATAATTGTTTACCTGAAAGATTTTTCAGTGAGAATCACACTGATATTAGTGTTCTGGTAATTCCTGGGGGAAAGGCAGT AAATGTTAAACTAGCTTTCTCGTTTGATATGTGTTATTTCACTTTTTGCTATGTTGTGGATAAATTCTTCTTACATTGACCACCCCTGACTTATAACTTA GTTACATTTGGCACCCCTTTTGTTTCAAAAGTTGGAGGATAGTATAATTATTATCACCTCCCCTCTAGGTGGGGGTGGGAATGATAATTGAATCTCAGGA GTGGTGAATACTGGTGAGTGTAGTTTTTACAACAATAGAGGTGCCGAATATAATTAAGTCAAACCTGAAGGAGGTTAGTGTGATTTTCCTAATAAATTAA TGAGTTCAAATTATGAGATTTAAGTCTCAACTGGAATACAGTTAATAGAATGGTTGAGCAATTTATTTTATTTTATAGAAAGTAAATCTTAGAATTAGAG TTGGTAGAGGAAAAATACTGAATGATAGATTGAAGATGGCAGTTTGTCAATAACTTCCTTCCTGGAGAGTGTAGCCTTCTTTCAGCTTTAAATATTTTAT ATATATGTCAATACAAAAGTTTTACAGCTTGTTGTTTCATTGATTTTATGATCTGGTTATACTGATGACTGATTATGTTTTGGGAGTTCATGATTATTTC TTTGTTGATTATGTGCAGCATAATGTAAAAGAGGACCTGGCGAACTTAATAGCACCACTGATGATTAGGCCGATTACAAGGTGGCCCTTTTTCGTATTTT TGGGGGGTGCCATGTTTTGCTTGCTAGCTAGCAGTACTTGTCATCTCCTTTCTTGTCACTCTGAGCGCCTATCCTACATGATGCTGAGGCTTGACTATGC AGGAATTGCAGCCCTGATATCTACCTCTTTCTATCCTCCAGTATATTACTCTTTTATGTGTTACCCATTCTTTTGCAACCTATACTTGGGATTCATTACT CTGCTGGGTATTGCCACCATGTTAGTTTCTCTCCTTCCTGTCTTTCAGACTCCAGAATACCGCACCATCCGCGCATCCCTTTTCTTTGGGATGGGTTTTT CTGGATTAGCACCTATTCTGCACAAACTATTTTTATTCTGGGGCGAACCTGAGGTATTTCATACAACTGGGTATGAGATTCTGATGGGTGCTTTCTATGG CATTGGAGCACTGGTTTATGCTACTAGGATTCCAGAAAGATGGATGCCTGGGAAATTTGACATTGCTGGACACAGTCACCAATTGTTTCATGTACTGGTT TTGGCTGGGGCTTACACTCATTACCAAGCGGGATTAGTTTATCTCAGGTGGCGTGACCTTCGAGGTTGTTGATTTAGTGCTATGGCAGATCCAATTGATT TGTTGTGTTGTATAAACGGTATGTATGTTTCAATTTGTATCTTTTATATTGATGTGAAATTGTGACTATAGTCCAGGATGTTTATGAACCTTAGGCATTA ATGTGTACACTTAGAATCCTCAAGCGCAAATAAGTAATAAAAACTTTATTTGGTCTATTGGGACTTGATAGAACCAATCTTCTCACTATTTTTGTGGGAG AAAGCATCCTTACATTCAAGTTGTTTGTGTAGTGCTCACTTGGGAAGTTGGAATAAATATTTCTCTGCATCAAAAGCATCATGGCTTGTCTTACACAGGG AAAGATAATCCTACTTTGTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_155847; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441764
| Blastp | Heptahelical transmembrane protein 5 from Arabidopsis with 70.89% of identity |
|---|---|
| Blastx | Heptahelical transmembrane protein 4 from Arabidopsis with 85.39% of identity |
| Eggnog | Channel protein (Hemolysin III family(COG1272) |
| Kegg | Link to kegg annotations (AT4G38320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423825.1) |
| Pfam | Haemolysin-III related (PF03006.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |