Ll_transcript_441772

• Id Trinity: TRINITY_DN47827_c0_g1_i8
• Name Transcript: Ll_transcript_441772
• Sequence: GGTCTTTCTAAATCATACGGAAATCCCTTTCACCCACGTCATTTTCTCCGCTCTCTCTTTTTCTTCTTCCCCTTCCATTCTCTCCTAACCATATATATTC GTACCCATTACAAGCCATTTTCTCCGTTTAGGTTTTCCTTCTTCTATTTCAATTCAGGATGAGTAATGAATATTTAAATCTCAAGGATGAAAGAGAATGT TCTGGAAAAGGGAAAAGGCTTTGGAAGAAGGTGAAGTATCAACTAGTTGAATACCACGCTTTACCTGGTTATTTGAGAGACAATGAATACATTCTAGCTC ATTATCGATCTGAATGGCCAATGAAGCAAGTTTTGCTCAGCATCTTCACAATTCATAATGAAACTCTCAATGTTTGGACGCATTTGATTGGGTTCTTCCT CTTTCTCGCTTTGACCATATACACTGCCATGCAAGTTCCAAAGGTTGTAGATCTTAACTCGCTACAGCATTTACCTGACATGCTAAAAAACGTCGACCTG CACAAATTACAATCAGAACTTTTACTGTGCCTCCCTTCATTGCCTGATTTTCACAGACTCAGGGAGGAATTAAGGACTACAATTCCATCAATCTCAAGTT GGCACGTAAAAGAACTTCTATATAATTGTTTACCTGAAAGATTTTTCAGTGAGAATCACACTGATATTAGTGTTCTGGTAATTCCTGGGGGAAAGGCAGT AAATGTTAAACTAGCTTTCTCGTTTGATATGTGTTATTTCACTTTTTGCTATGTTGTGGATAAATTCTTCTTACATTGACCACCCCTGACTTATAACTTA GTTACATTTGGCACCCCTTTTGTTTCAAAAGTTGGAGGATAGTATAATTATTATCACCTCCCCTCTAGGTGGGGGTGGGAATGATAATTGAATCTCAGGA GTGGTGAATACTGGTGAGTGTAGTTTTTACAACAATAGAGGTGCCGAATATAATTAAGTCAAACCTGAAGGAGGTTAGTGTGATTTTCCTAATAAATTAA TGAGTTCAAATTATGAGATTTAAGTCTCAACTGGAATACAGTTAATAGAATGGTTGAGCAATTTATTTTATTTTATAGAAAGTAAATCTTAGAATTAGAG TTGGTAGAGGAAAAATACTGAATGATAGATTGAAGATGGCAGTTTGTCAATAACTTCCTTCCTGGAGAGTGTAGCCTTCTTTCAGCTTTAAATATTTTAT ATATATGTCAATACAAAAGTTTTACAGCTTGTTGTTTCATTGATTTTATGATCTGGTTATACTGATGACTGATTATGTTTTGGGAGTTCATGATTATTTC TTTGTTGATTATGTGCAGCATAATGTAAAAGAGGACCTGGCGAACTTAATAGCACCACTGATGATTAGGCCGATTACAAGGTGGCCCTTTTTCGTATTTT TGGGGGGTGCCATGTTTTGCTTGCTAGCTAGCAGTACTTGTCATCTCCTTTCTTGTCACTCTGAGCGCCTATCCTACATGATGCTGAGGCTTGACTATGC AGGAATTGCAGCCCTGATATCTACCTCTTTCTATCCTCCAGTATATTACTCTTTTATGTGTTACCCATTCTTTTGCAACCTATACTTGGGATTCATTACT CTGCTGGGTATTGCCACCATGTTAGTTTCTCTCCTTCCTGTCTTTCAGACTCCAGAATACCGCACCATCCGTGCGTCCCTGTTCTTTGGGATGGGTTTTT CTGGTGCAGCACCTATTCTGCACAAGCTCTTTTTATTCTGGGGTGAACCTGAGGTGTTTTACACAACTGGATGTGAGATTCTGATGGGCGCTTTCTATGG CATTGGAGCACTGATTTATGCGACTAGAATTCCGGAGCGATGGATGCCTGGGAAATTTGACATTGCTGGACACAGTCACCAATTGTTTCATGTATTAGTC GTGGCTGGGGCATACACTCATTATCGTGCCGGATTAGTTTATCTCAGGTGGCGTGACCTTCGTGGTTGTTGATAATTGAAGTTATGAGCAGATCAGCTGT TGATTGCTCTACTGTATAAATGGTAAGTATGTTTCAATTCATATCTGATTGAGGTGATGGGAAGAATATAGTACCTGCCGAAAAAAGATTAGCTATAGTT ATTATTACCTAAGACAAAATAGATGGAAAACTAGTAGAAGCACATTATGGCATGGCACGTAATCAATCTTAAGAGTACTTGATTGCAGATGGACTAAAAA GTAGTTGCTCCCTATCAAGGAAACAATGGAACTTAATTTGCTTTCAATTATAATCAAATTATGTTGTTTTTGTACGTATAAGTTATGTCATTGTATTAGT AATTTCTATAAAATCTTCAGAGGGTCAAGTCATATTTGCTCTATATGACTGAAGTCTATGGCTTTGCTCAAAGCGTAGATGGGAAATGGGGTAGCGACGG TGATGTGAGTGTTACTTGTGGCCATGGCCATGGCCGTAGTTGAGTGACGGTGGCCTTCGATGCCAGCCAAACCATTGTGGAATTGTTGGGATGGTGAATT TTTGCAATGGGCTGTAGTAGTTTGTAAGCTTCTGGTCCAACTTTGTTGGTGATAAGCAAGTATCCCAAGCTTAGCTTCCGTTTTTTTCTTCTCAAACCAA CCAAACGCTGTCTATCAGGTTTTAACTTGTCCAATAGAAAGTCTCCTACTTTCAATTGTACATCTCTTATTTTACTTAACAGGCTCCAAAATTTATATGT TAAGCTT
• Tissue: pods
• Gene name: LI_gene_155847;
• Additional information: details;

Expression of Ll_transcript_441772

FPKM

• PAB: 0.5
• PNAB: 0.2
• PS1: 0.7
• PS2: 0.6
• PS3: 0.4
• PW1: 0.3
• PW2: 0.4
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_441772

• Blastp: Heptahelical transmembrane protein 5 from Arabidopsis with 70.89% of identity
• Blastx: Heptahelical transmembrane protein 4 from Arabidopsis with 84.47% of identity
• Eggnog: Channel protein (Hemolysin III family(COG1272)
• Kegg: Link to kegg annotations (AT4G38320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423825.1)
• Pfam: Haemolysin-III related (PF03006.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;