| Id Trinity | TRINITY_DN47833_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_441292 |
| Sequence | TTTTTATTTTATGAATTATGTTCTTAAATAAGAATGAAGAGAAGAGCCAAGAGAGAGAAATAAGAATGATGAGATATAATGAAAAAATATAGATGTTTGG TTGAGAGTGATATTTGCTACTGCGAGGAGAAAGTAGATTTGTTCTTATTTTATATAGGGAGTTGTAATAAATTATAAAATAATATATGAGACCCAAATAA GAATTATTATGTTTTCTGGTTGATGCTCTAAGCTTCTTCTTTATTTGCCATATTTATAGATTCTATCTGATATAAGTTGATCACATTTGCTATGTTTCTT GTTCTAGTTGCAAACTTCAGTGCTATTTTATTGACACCCTTTTTCTCTATCTTCCAATATTCTCTTCCTCTATCATCAAAGTTTCCTTCTTGGTAACAAA GATAGTATTTTTCTTCTTTCTTCCCTCTCTGCTTTTCAGGTTTTACTCTCTCTTCATAACTGTTTATGCTTTATCCATCATAAATACAAGTTCTTCTTGC AACTCCTTCATAAATGCTAGTTATTGGCATAACTTAATGTTCATTCTAAATTTCAGGTTATTATTCTAAATAGCAGAACATAGTATCTTCATATTGTTGA GGACTAAAATGTTTGAGGGGTTATTCAAACCGAAATTCTATTCAAAATGCAAATCCTATGCAAGGTTAATAAAGATGAGGCTAGAGGTGATACAGAAGAA GAGGAATGCAGTGCAGAAGTTTCTTAAGAAAGACATTGCTGAACTTCTTAGGAGTGGCCTTGAATACAATGCATATGGAAGGGCTGAAGGGCTTCTGGTA GAGCAAAATATGTCATCCTGCTATGAACTCATCGCAAAGTTTATCGGATGCATATCGGATCATGCACGAGACCTTTGTAAGCAAAGGGATTGCCCTGATG AATGTAAGGAAGCTATACCGTCATTGATATATGCTGCAGCTAGGATTTCCGATCTGCCCGAACTTCGTGAGCTTAGAAAATTGTTTACAGAGAAATTCGG GAGTTCTCTTGAACCTTATGCAAGTAAAGAGTTTGTTAACAAGCTGAGGCATGAACCTCCTTCAAAAGAAATGAAGATTCAACTGTTAAGTGATTTAGCA GAAGAGTTCTCTATAAAATGGGATAACAAGGCTTTGGAGCAGAGACTTTACTCGCCGCCTCGGTTACATGAAGAAAAACCTAAGCATTATCCAATGAATA ATCATAATGACGAAAAATGGCACAAGATGAACAATGATCTTGTCGTGCCGAAAAGAAATGAAATAGATCGAAAGAAGGATATCGTTGATGCTTCATGGAG GGTACAGAGCAGAATTGCAAGTGTTGATGAAACAAGTGCAGACAAGTTATCACATGATAACCAAACAAAAGATTGTTCAAGTTCATTGAGAAGTGTATCT AAGGATGAAGTAGAAAACAAGAGGGCATTTTCCTATGGTTTTGTTCCACCTCCTTATGTCAAAGAAACATTAAAGAATAAAGGTGAAAGCAATTTGAAGA AAGCAAAAGAATCATCAAATCATGATCTTCATGAACCAGTTCTTGAAAAAAAGCCAATACCAAAATCAGTGAGGACTAGATCTCTAAAACCAAATCCACT TAGCCACAATGACAATGTTTCAGATTCTAAAACTGATGGTAATGAAAAGGCAGAGGATATGCTTTTAATGCATTATAGTAAGAAAGAATCTCCTTATACA AAATCAGGTTCAAGTGCAGCACCAGTAAGAGGTATATCTTTTCGTTATAGTCGTGCGGCCGAAAATCGAGATGAACACATAACTTCAAAGGAAACATTGA AAGGACATGAAAGAGCAACTTCCTTAGCACCAGAAATGCTGAGTAGAGCAAGGCATGTGCATCCTAGTTTACCTGATTTTGATGACTTCAAAGCAAATAT TGCATCACTTAGAGGAAGATAACCCAAGAAGCAGCTTATAGAGCATGAGAATTTTTTTCCTTTTTCCTTAAATTCTTTAGTATTTGATTGTTCATATAGT GTTTTTCCTTTCTGCCTATTATTTTATGCCAAATCTATTATTTGTACAACAAAATTGAATATCAATATAGTATTTTATATTATCTCTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_155888; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441292
| Blastp | IST1-like protein from Dictyostelium with 28.81% of identity |
|---|---|
| Blastx | IST1-like protein from Dictyostelium with 28.81% of identity |
| Eggnog | positive regulation of collateral sprouting(ENOG410YG52) |
| Kegg | Link to kegg annotations (DDB_G0289029) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448141.1) |
| Pfam | Regulator of Vps4 activity in the MVB pathway (PF03398.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |