Id Trinity | TRINITY_DN47834_c3_g1_i2 |
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Name Transcript | Ll_transcript_441511 |
Sequence | ATATAAAATATGAGTGTAATTTTCCTACGTCTTTATTTATATAATTATACATATTTAGTACATCATCCGTTATTTATTTTTATTTCTTCTTTTATTTAAG AGGTAAATGATAATACAACTACATTATATAAAAGTGTTACATTGTGTAATGAATACATCTTTTTCTCATAATCATCACTCCATTATTTTCATTTCATTGC TTTGTTGCTCTTTAGGATGATAATATTTTATTCCGAATAGCCCTATTTGATGATTTTGATTTCATGTTATTATAATCACCATTCCATTTTTTTTTTCATT TCCTTGCTTTGTTGCTTTGCAAGATGACAATATTTTAATCCAAGTAGCCCTATTTGTTGTTTTTGACTTCATGTTATTATGATTACCATTCCATTCTTTT CATTTCCTTGCTTTGTTGCTCTGATTCAACTACACAACTCTTTCAAAATTTGTTTCTCTTTTCACTACTCCATTTCAAATGTCACTAGAGGATGGAAATG ATGGTGATTTAAGAGTTCGTGTGTTCCCTTCATCATCTGAGTTGCTTGAAAAGCTGCATCAAAGATGGAATAACGTGGAGAAACAACCATACCCTGCTAT GTATTCTAGTATATATGGAGGTATCATACTTGATCCAGCAATGATGCTAATACCGATCGACGATCACATGGTACATCGAGGGCACGGTGTGTTTGACACA GCCATTATTTTGGATGGTTACATCTATGAGTTGGATGTTCACCTCGACCGATTCCTCAGATCATCCTCAGCAGCAAAGATATCCTCTCCGTTTCCTCGGT CAACTCTTCGCAGCATTTTGATACAGCTAACCACTGTATCGAACTGCAAGAAAGGTACTCTAAGATACTGGTTGAGTGTAGGTCCTGGAGATTTCTTGCT GTCACCAAAAGGATGTCGAACCCCTGCATTCTATGCAGTAGTCATTGATGAAGATGTTTTCCAACACAAAGAGGGTGTTGAAGTAATTACTTCAAAAGTA CCAATGAAGGCACCACTATTTGCAACCATGAAGAATGTGAACTATCTTCCAAATGTTCTTTCAGTGATGGAAGCTGAAGAGAAAGGAGCATTTGCTTCTA TATGGGTTGACGAAGCAGGTTATATTGCTGAAGGAAGCTAAATCTGCTACTGAAATGATGTATGTAGGAAGCACGCTTCCTGTGTTGCCTATCATCGCGT GGGATGATCAACCGATCGAAAATGGAAAGGTTGGAGAATTAACAATGTCACTTTCAGATTTGATATGGAATGATATGGTAGCTGGGCCTGACTCACAGAG AATACAAGTTACTTATGTTGAGTGAAGTTGCAATGTTGTCAAATTAAATAAAGGCTTTTCATAGTTCTTGTTGCATAGAGGTTTCTCTTTTTATTTGCTT TGTGTGTTGCAAATGTGAACAAATCTTAAAAGTGAAGCTGCAGAAGTTTCATACTATACAAAATTTATGTCCCAAATAAGTAGTTATTGCATTTGGCCTT GATTTTCAAACATGTTTCCATGTCCATCACTTGTATATGCATACATTCTTTTTGATGAAAATAGATACACAATATAAAAGGGTATGTGTTTTGTGTGTAT TCAAGGCAAGAGAAATCTCAAATATTT BLAST |
Tissue | pods |
Gene name | LI_gene_155906; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441511
Blastp | D-amino-acid transaminase, chloroplastic from Arabidopsis with 63.04% of identity |
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Blastx | D-amino-acid transaminase, chloroplastic from Arabidopsis with 59.9% of identity |
Eggnog | brancheD-chain amino acid aminotransferase(COG0115) |
Kegg | Link to kegg annotations (AT5G57850) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_016171254.1) |
Pfam | Amino-transferase class IV (PF01063.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |