Id Trinity | TRINITY_DN47841_c3_g1_i1 |
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Name Transcript | Ll_transcript_442647 |
Sequence | ATTTCTCCCACTTTTGCCAATTAAGTTTCTAGTAAATGAGATTTCTATCCTAAATAATTATAATTCAATTCAATCAAACATCTACATAATTATGTCCACA AGATTTCTCTACAATCTTGCCTAAACCCTAAAACTAACGTAGCTAACATTTTATAGAAATCACCATCACTATAAACCAAGAGCTCCACCGTCATCAACTC CGAACTCCGCCGTCGTGCTCTCTAAACTCACCATTCGGGATTTCTTCTTCGTGAACCCATCACCATCACGCGATTACTTCTTCACTCTTTTTTGTTAGGG TCATCAATGAACATGGGAAGAGGGAGGAAGAATTTGAAGAGGGCATCAGAGGAAGAGCATGTGACCCTTCAAGATGGCCAAACCATCATGCAGGTTCTCT CTCTTCGTGGCTCCAATCTCATTGAGGTAATGGATGCACATGGTGAGAAATCACTAGCTCTTTTTCCTGCCAAATTTCAGAAAAGCATGTGGATGAAACG AGGGAGCTTCGTTGTAGTTGATGAAAGTGCAAAAGAAAAGGCTCTTGAATCAGGTTGCAAGGTTGCATGTATTGTTTCTCAAGTTCTTTTCTTCGAACAA GTTCGGGAACTTAAGAAATCTCCAGAATGGCCTGAAATTTTTAAATCTGGGATAGGTGATTCAAATGAAAGAACCACATCCCAACAAGAGAAGAAGATGG TTAAGAGTGATGATGATGATAGTGATAGTGATGGACTGCCCCCACTAGAAGCCAATACAAACCGGATAAGACCTGTTGAGTTGCAAGCTGATGATGATTC AGAATCTGGTTCGGATACAGATACTTGAAATCATAGTTCGATTCTCTGTGTTGCAATGAAAGATTATTTTCAAGTTCAACCGTCCCATCTTCTAATTAGA TTCTATATTTACATATTTTGACTTTCAACTAAAAAAGGAATTGAATTTGTATTAACATGTCAAATTGTAAATCACAGACAGCTTCTTTTTAAGTCATTTG TTTGATCAACTGTCTGTTTGATGTGTTTTTCTTCTTAATGTTTGACCTTTATAGTTACTTCATTTTTATCACATTGTACTATGTATTGATCTGGTAGTCA GCCGAAGCAATGGAGATTTCATCTTATGACTGTTAGACGAAGGCCAGTCTTTTCACATTGAGTTTGAAGTGCCTGCAATTTCATCTGATGGTTGCACTTA TCAATTAGTAGTCTGGGAATCAAGCTACAGTGGACCTATGTAGTTTCCATATACAT BLAST |
Tissue | pods |
Gene name | LI_gene_155962; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442647
Blastp | Probable RNA-binding protein EIF1AD from Bos with 36.72% of identity |
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Blastx | Probable RNA-binding protein EIF1AD from Bos with 36.72% of identity |
Eggnog | eukaryotic translation initiation factor 1A domain containing(ENOG4111N6Z) |
Kegg | Link to kegg annotations (615726) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414213.1) |
Pfam | Translation initiation factor 1A / IF-1 (PF01176.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |