Id Trinity | TRINITY_DN47842_c2_g1_i10 |
---|---|
Name Transcript | Ll_transcript_441814 |
Sequence | TTCAAAATCTTCAAAAATGTGTTGAATTGGATCACAACTGGGTTGAGTTTGATGATGTTCGATATCATCTTCAGGTTTCAATGAAGAATCCTCATATTTT GTTGCTATCAGTCTCATTGCCTACCCCTTCTTCAGAAACTATTTTTGTCCGTGGACTTCCCTTTGGAGCCATAGAAGCGATAAAAGCGGCGTATGGTGTT CTTGTACAAATTCTTGATCCTCCCAGGGATGGTTTTAACCTCACATTGAAAATTAATCTGGCAAAGCTTCCTGCAAATCAAGAGCAAAAACATGCTTTTT TGGTTAAAGTTGCATCTGTAAGAGAGGTTGTCCTTGGTGCACCATTGAGAGTAGTTTTAAAACATCTTGCTTCAAGAACTTTAGCTCGGGACGTTGATCC ACTTGTTGCCCTTGTTCATCGGCCGAAAGAGTCTTTCTTTCTTGTTCCTCAGGCTAATAAAGTCACTGTGGTGTATCCTATGAGATTCAACGACTCAATA GACATTGCCCTTGCAACTTCATTCTTGCAGGAATTTGTCGAAGCCAGACGTACAGCCGGACTTAATAATACCCCTCCTTGTTCATGGTCTTATACTCCTC CACTGGAACTGAAAGGAGTTTCTGCTGATGCATTATCTGCAAATGCAGGATTTGTAACATTTGTTATCTTCCCTCGTCATGTCGAAGGACAGAAACTGGA TCGAACAGTGTGGAATCTATCAACTTTTCATGCATACGTTAGCTACCATGTTAAGATTATGCATATTTGTAGCAGTGCTCAGAAGGATTCATGCATACAC GAATGCGGCGTCGAGTGGAGTCATTGATTCAGGCTCTGGATAGTGCCAAGTCAGATCTTGAGAATGCAAAGAAAACAACATCACAGAACAGATCCTTCAA ACGACTGAGCCTCAAGGATTCAAGAGTGGACTCATTCTCTTAAAAGGAAGCTTGGTGATGAAGTAAAGATTTTCTGCTTCTTTTGGACAATACAATCGCG AACCAAGGAATTGCTGGTGCAGATTGTTCCAGTTGCTTGTAGTAGCTTGAAGATATGATTCTCCTTTTGAACTCTACTGGCTGAGTATCAAAGAAACCGC TGGCCGATTTTCGCAGACCGCTCCAAGTTCTGTAATTTATTCATGCAAACTAGGATACAAGATAAGCGACCATTTATTGGGGTACATTCTCTCTTTCTTT CCTTTTTTTTCCAGATACAATAACCAGTTTTCCTTTTATTCTGAAGTTATCTGTAGTATATTGATGCAAGCTTAAACTTACTAATGAATTGACATGGTTT AGCTTTCGACTTTGCGGGGTTTTAAACCAGCAAGATCATGTAGCATGCTTTTCTGGGTTGCAGTTCAAATTCATTGCGTTTACTCGTAGACACCGACGAA TCTTTTAAAGACGTAATCCTTGCTCTAGTTGATTCTTTGTTTTCAGAACTACACTTAGTTGTGATTAGATATGAAAACATATGCAATACTTGTACTGTGT TAGTAAAACTAGAATAGTTTTTGAATGCTAATAAGTAATAACTCAAAAATTGAGGAACTTACACCATATATATCTGTATCAATAGTCCAACTGAAAACTA GCTTGTACTCCTAGAATTCAAAGAAATGATTATACCCTTGCCTCTTCATGTGTGAAGTAGAAATCAGGTAGGGTTGGTTGTGGCTCCAAGATAGACATAG CTCCATAGTGTAAACATTGTATGACTATTATTGAAGAAGGCATCCTTCTCTTACTTTTTCGATAGTTACATGGTACGCGATACTGGTACAGATAGGTGGT TCAGTTGGGTACGTGGTTTGTCACTTTTCACATTAATTAGAACATCTTTATGACGAAACCAGTACGTGCGATGTGGTATGTGATACGGTGAATTAGGTAT GCAATGCGACGGGTAAATAAGAGAATTATATGAATTTGGTGCTGCATATTTAGCAAGAACTTGGTTGCTGCTGCTCTGGGTATTTCTTGAAGGTGATTCA CTTCCAGCTACAGAGGAATCCTCCAAAATCCTAGTTAATGTATTGCAAGATTGTTTTGTTTTCAGTCTTAAGAAATCAGAATTTTCAAAGATTAAATATG TTGTCTTAAATGTGTTTTATTTTTAATTGAATAAAATTAAAAAAAATAATGAATTGATTGTAAAAATTGAA BLAST |
Tissue | pods |
Gene name | LI_gene_155984; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441814
Blastp | Actin-related protein 2/3 complex subunit 2A from Arabidopsis with 65.16% of identity |
---|---|
Blastx | Actin-related protein 2/3 complex subunit 2A from Arabidopsis with 65.93% of identity |
Eggnog | protein 2 3 complex subunit(ENOG410YKF6) |
Kegg | Link to kegg annotations (AT1G30825) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446962.1) |
Pfam | Arp2/3 complex, 34 kD subunit p34-Arc (PF04045.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |