| Id Trinity | TRINITY_DN47842_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_441815 |
| Sequence | TTCAAAATCTTCAAAAATGTGTTGAATTGGATCACAACTGGGTTGAGTTTGATGATGTTCGATATCATCTTCAGGTTTCAATGAAGAATCCTCATATTTT GTTGCTATCAGTCTCATTGCCTACCCCTTCTTCAGAAACTATTTTTGTCCGTGGACTTCCCTTTGGAGCCATAGAAGCGATAAAAGCGGCGTATGGTGTT CTTGTACAAATTCTTGATCCTCCCAGGGATGGTTTTAACCTCACATTGAAAATTAATCTGGCAAAGCTTCCTGCAAATCAAGAGCAAAAACATGCTTTTT TGGTTAAAGTTGCATCTGTAAGAGAGGTTGTCCTTGGTGCACCATTGAGAGTAGTTTTAAAACATCTTGCTTCAAGAACTTTAGCTCGGGACGTTGATCC ACTTGTTGCCCTTGTTCATCGGCCGAAAGAGTCTTTCTTTCTTGTTCCTCAGGCTAATAAAGTCACTGTGGTGTATCCTATGAGATTCAACGACTCAATA GACATTGCCCTTGCAACTTCATTCTTGCAGGAATTTGTCGAAGCCAGACGTACAGCCGGACTTAATAATACCCCTCCTTGTTCATGGTCTTATACTCCTC CACTGGAACTGAAAGGAGTTTCTGCTGATGCATTATCTGCAAATGCAGGATTTGTAACATTTGTTATCTTCCCTCGTCATGTCGAAGGACAGAAACTGGA TCGAACAGTGTGGAATCTATCAACTTTTCATGCATACGTTAGCTACCATGTTAAGTGCTCAGAAGGATTCATGCATACACGAATGCGGCGTCGAGTGGAG TCATTGATTCAGGCTCTGGATAGTGCCAAGTCAGATCTTGAGAATGCAAAGAAAACAACATCACAGAACAGATCCTTCAAACGACTGAGCCTCAAGGATT CAAGAGTGGACTCATTCTCTTAAAAGGAAGCTTGGTGATGAAGTAAAGATTTTCTGCTTCTTTTGGACAATACAATCGCGAACCAAGGAATTGCTGGTGC AGATTGTTCCAGTTGCTTGTAGTAGCTTGAAGATATGATTCTCCTTTTGAACTCTACTGGCTGAGTATCAAAGAAACCGCTGGCCGATTTTCGCAGACCG CTCCAAGTTCTGTAATTTATTCATGCAAACTAGGATACAAGATAAGCGACCATTTATTGGGCTTTCGACTTTGCGGGGTTTTAAACCAGCAAGATCATGT AGCATGCTTTTCTGGGTTGCAGTTCAAATTCATTGCGTTTACTCGTAGACACCGACGAATCTTTTAAAGACGTAATCCTTGCTCTAGTTGATTCTTTGTT TTCAGAACTACACTTAGTTGTGATTAGATATGAAAACATATGCAATACTTGTACTGTGTTAGTAAAACTAGAATAGTTTTTGAATGCTAATAAGTAATAA CTCAAAAATTGAGGAACTTACACCATATATATCTGTATCAATAGTCCAACTGAAAACTAGCTTGTACTCCTAGAATTCAAAGAAATGATTATACCCTTGC CTCTTCATGTGTGAAGTAGAAATCAGGTAGGGTTGGTTGTGGCTCCAAGATAGACATAGCTCCATAGTGTAAACATTGTATGACTATTATTGAAGAAGGC ATCCTTCTCTTACTTTTTCGATAGTTACATGGTACGCGATACTGGTACAGATAGGTGGTTCAGTTGGGTACGTGGTTTGTCACTTTTCACATTAATTAGA ACATCTTTATGACGAAACCAGTACGTGCGATGTGGTATGTGATACGGTGAATTAGGTATGCAATGCGACGGGTAAATAAGAGAATTATATGAATTTGGTG CTGCATATTTAGCAAGAACTTGGTTGCTGCTGCTCTGGGTATTTCTTGAAGGTGATTCACTTCCAGCTACAGAGGAATCCTCCAAAATCCTAGTTAATGT ATTGCAAGATTGTTTTGTTTTCAGTCTTAAGAAATCAGAATTTTCAAAGATTAAATATGTTGTCTTAAATGTGTTTTATTTTTAATTGAATAAAATTAAA AAAAATAATGAATTGATTGTAAAAATTGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_155984; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441815
| Blastp | Actin-related protein 2/3 complex subunit 2A from Arabidopsis with 68.5% of identity |
|---|---|
| Blastx | Actin-related protein 2/3 complex subunit 2A from Arabidopsis with 68.9% of identity |
| Eggnog | protein 2 3 complex subunit(ENOG410YKF6) |
| Kegg | Link to kegg annotations (AT1G30825) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446964.1) |
| Pfam | Arp2/3 complex, 34 kD subunit p34-Arc (PF04045.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |