Ll_transcript_442882

• Id Trinity: TRINITY_DN47843_c6_g1_i1
• Name Transcript: Ll_transcript_442882
• Sequence: TATTTTTCTCCAAGTGCTCCATAACTAAAGGAGAGTAACATAAATTACTTATTTTTGGGCCGAGCGAGGGTAACTATTGAGCACCAAACCGTATCGCATG GCATACAAACCCCGCGCTCGTCGCTGTCATTGAAACACTTTTTCTCTCTTCACTCTTTCATTTCTCACTCCAAAACCCCTTCCTTCAAATACCCCTCTCT CTTCTCTAGGGCACAGAAACAGTACAATACAATGAAACGCGACTTCTACGAAATCTCCGAAGACGAATGGGAGAACCACAACACCTCTTTCAAACCCTCT CGTGTTCTCAAAGCACCGAGGCTTTCTTCTTCCTCTTCCTCCTCTTCGCGGCTTCCGCCACCACCAATCGAGTCCTTCGCTTTTGGTTCCAATAACAAGC CTGAGGTTTCCGATCACGGCGACGACGATTGCGTGGAAATCGCGCCGAATTCGACACTTTTTCGGGAGAGCAACGACAGCCTGGACGACCTGGAGGACGA AGACGTTGATAATTCGACTGCAGCCCCCGCGCCGAACCGAGGCCGCCGGTTTATAATCGATGACGAAGATGATGACGTCAGCGACAGGGATGTTGCGGAA GTGTATGAGATAGAGTCCACTGAGGAGGAAGTGGAAGAGGTTGAGGATTTGAATGAAGGTGATGTGGTTGGTAAAGCTTTGCATAAGTGCTCGAAAATTT CGACGGAGCTGAGAAAGGAACTGTTTGGTTCTTCTGGTACCGCTTGTGAAAGGTACTCCGAGGTGGAATCTTCTTCAGTGAAAATTGTCACTCAGGAGGA TGTTGATGAAGCGTGCGGGTCTGAGGATTCGGATTTTCAGCCTCTGCTGAAGCCGTATCAGCTAGTTGGTGTCAATTTTTTGCTTCTGTTGCATCGGAAG GGTATCGGAGGAGCCATATTGGCAGATGAAATGGGTCTTGGCAAAACAGTTCAGGCTATCACATATTTAACTTTGTTGAAACATTTGCACGATGATCCTG GTCCTCATCTTATAGTATGTCCCGCTTCTGTTTTGGAAAACTGGGAAAGGGAACTAAAAAAGTGGTGTCCAACTTTCTCTGTTCTTCAATATCATGGGGC TGGACGAGCAGCATATTGCAAGGAGTTGAACTCCCTGTCCAAAGCAGGATTGCCTCCTCCATTTAACGTCCTTCTTGTGTGTTATTCACTTTTTGAACGA CACAGTCCGCAGCAGAAAGATGATCGTAAAGTTCTGAAGCGTTGGAGGTGGAGCTGTGTGCTGATGGATGAGGCACATGCTTTGAAGGACAAAAATAGCT ATAGGTGGAAAAATCTGATGTCTGTTGCACGAAACGCTAACCAGCGCTTGATGCTGACTGGGACACCTCTTCAGAATGACCTACATGAGTTATGGTCATT GTTGGAGTTTATGCTGCCTAATATTTTTGATAGTGAAGATGTTGACTTAAAAAAGTTACTAAATGCAGAAGATAGAGATTTAATTGGTCGTATGAAGTCC ATCTTGGGGCCATTTATTTTGCGGCGTCTAAAATCTGATGTGATGCAGCAACTTGTTAAAAAAATACAGCAGGTTGAATATGTTGTTATGGAAAAGCAAC AAGAACATGCTTATAAGGAAGCCATTGAGGATTATCGTGCTGTTTCACAAGCTCGGATTGCAAAGTGTTCCGACCTTAACTCCAAAAATGTTCTTGAAGT CCTTCCTAAACGGCAGATAAATAATTATTTTGTTCAGTTCCGCAAGATTGCGAACCACCCCTTGTTGATAAGGCGGATCTATAATGATGAGGATGTCATT CGCTTTGCAAGGAAGCTACATCCTGTAGGTGCTTTTGGCTATGAATGTACATTAGACAGAGTTATAGAGGAACTTAAAAGTTACAATGATTTCTCTATTC ACCGGGTAAATCTTATACCAAAGACAATTTGTTTCCTCACTTAGTATCCCCATGTTTGGCTTTCACCAATATGCTCAAGTAGTATACGATTTGTTATCGG GTGCCAAGTGGTAGTGGTTTTGGCTTATAAAATGTGAGTTAATACATGCTTTCTGCTATTATATCATCTGAATGTAGTGATAAAGGTCAAAGTAATAAAT GATTTGATAGAGGGAAGTCATCCTAAAAGAAAAATCATAGGGAAAATGACATCCTGAAAGGGCTATAAAATGTAATAATTCTGTCCATTCTCTCCTTGCA TATCATGATAGAAATTTCTTGAAACAACCATGAGCAGAGAACCAGAGAGAAGTCATAAACTTCATCTGGGTGATGGACAATAAGAGCCGGAGGGTTATAT TGTAGCTTAAAAGAGAAATATAGTGATAAACAATGAGCAGGAGGGTTATATTGTAGCTTAAAAGAGAAATATAGTGATAAACATTGACCTTTAAATCCTT GTTACTAGTTTTGCCTATAGTTTTTCACTTTTTCTTGCTCTACCCTTACCCTTAGCGATTGTGCTACCCTCCATCTAATTTACTCTCCTCACTAGACCTT CCATAGGCCTTCACCACATGTGTCAAAAATATTTAAGCTGAGGTTCTCCCATCCCTAATCCTATTTACAAGAAGTATGAAATGATACTTCGTATGCTATA GAACCCATGTTGCACTAACACAAGTCAACAACCCAACATTTAGTTGCTGCTGACTTTCTTTCTGTTGTGTCAATTCCCTTCTATTACAACAATAACCAAG TCTTAATTCTACTAGATGGGGTTAATTAAATGGATAAAACAGCGCCATGATGTTGTATCATATCAGTCCATTGATAAAACATTGATGTCTAAATTTTTCC TAATCATTTCACCCATGATTTTTCTTGGCTGAAGTTGGACTAACCTCCATTTGGTCTACTCTCCTTCATGAGGCTTCTAACAGTCATTTCCACACATCCC CAAACCATCTAAGCTTCTACTTCACTATGGTGTCAAGGATAAAAAGGGGATTCTTTCAGATAAGCATGTTATGCTTTCTGCAAAATGTCGGTCCCTATCA AAACTTCTTCCTTCACTGAAGAAGGGTGGCCATCGTGTTTTGATCTTTAGTCAGTGGACATCAATGCTTGACATATTGGAGTGGACTTTGGATGTCATTG GGTTTACCTACAAACGGCTTGATGGAAGTACACAGGTAGCAGAGAGGCAAACAATAGTGGATACATTCAATAATGATACTTCCATATTTGCATGCTTGCT TTCCACAAGAGCTGGAGGTCAAGGCTTGAACTTAACCGGAGCTGATACTGTCGTAATTCATGACATGGATTTTAATCCACAGATTGATAGACAAGCAGAA GACCGTTGTCATCGAATTGGTCAAACAAAGCCTGTAACCATATATCGGCTGGTGACCAAGGGAACAGTTGATGAAAACGTATACGAGATTGCAAAGAGAA AGCTGGTATTGGATGCTGCTGTCCTTGAGTCCATGGATGTGGTTAATGAAGGTGACATGCCTGAGAAGACCATGGGAGAGATATTGTCTGCAATTTTGTT GAGTTAAAAATTGAGCCTAAGAAAACAATTTACTGAAGAGTTAAATGGGGTATACCGAAAGTGTAAAGTTTTATACAATGAGCCTATCATTCATCATTAA TGTGTATGACTTTTATTTAACATTCAGTGATTGTCCGCATGTCAATGGTGGATGATGTGCTGATAGTGCAAAAATCTTTACACCATCAATGCATAACCTA TTTTCTCTTTGCTCCACCCCTTTTTTCTTCTTTGTAGGTTTGCACGAATTATATTTCTGATTCTGATCTTGTATTAGCCATATGATGATTTCAGAGTAAA GGGAATTGGCCGCAGGTGTACATTTAGCCTTAATTAATCCATGTATTGATGACAGTGAATAATCATTGTCGGTATCAATAGGAGAGTTAGTATAAATAAG TCACTGTAGAAGTTAGCAATTTTTTTGAACTCTTGTTGGAGCCCCAATGATGAAAGCTCCCCCTTGCATTTTAAATTTTCCACATTCCTATCTTTTCCTG TTATACTTTCTGCTATTTTCATTGTTCCATTTGCTGGAAAGAATGTTCTAGTTCTGTG
• Tissue: pods
• Gene name: LI_gene_155998;
• Additional information: details;

Expression of Ll_transcript_442882

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.1
• PS3: 0.1
• PW1: 0.1
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442882

• Blastp: Protein CHROMATIN REMODELING 19 from Arabidopsis with 67.24% of identity
• Blastx: Protein CHROMATIN REMODELING 19 from Arabidopsis with 68.54% of identity
• Eggnog: helicase activity(ENOG410XNUT)
• Kegg: Link to kegg annotations (AT2G02090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461602.1)
• Pfam: SNF2 family N-terminal domain (PF00176.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;