| Id Trinity | TRINITY_DN47857_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_441824 |
| Sequence | TCCATTTTGTTTCCTCTCTCCAGGTTAGTGAGCAAATAATACTGAAACATCATTTGAAGTCCCTTTTTCAGTGCTTCACCTCTTTTAGGATCAACCAACC TTTTCACTTAAAAAGTAGATTTAGCAACAGAAGCTCTAGTAGATTGTAAGCTATTACAAGCAAATGAAAAAAACTGGAGCTCTAATGATTTTAATGTTGA GGGCTTAAAGGGTTGAAGAGGCTATAATTAGATTCCAAGTTTCCATTTTTTTTCCTTTTCAGATTTCTTCTATCAGAGAAAACTTACTCCAGGATTGAAA TTTTCTCATGCTATGGTTTTTGTAAAAATATACTCTTTTTTCTGTGGGGGATTGAAATTAAAATTGATGATGTTTAATCTTCACTTGATATTCAGCTTGG AACCATGGTTTTTCCAAACCAATCCATGTTAGTTTCTGACCAGAGAAAGATTAATGGAAGGGGGAAGATTGAGATTAAGAGGATTGAGAACATCACCAAT CGCCAAGTTACCTTTTGTAAGCGCAGAAATGGATTGCTGAAGAAGGCATATGAACTTTCTGTTCTTTGTGATGCAGAAGTTGCTCTAATAGTCTTCTCAA GCCGTGGCCGCCTCTATGAATATGCTAACAATAGTGTTAAAGCATCCATTGAAAGGTACAAGAAAGCAAATTCAGATTCCTCTAGTGCTGGATCCACTTC TGAGGCTAATGCTCAGTTCTACCAACAAGAAGCTGCCAAACTGCGCGTGCAAATCAGTAACCTGCAGAATCACAACAGGCAAATGATGGGTGAGGCTTTG AGCCCTATGAACGCCAAGGAACTTAAAAGCCTTGAGACTAAATTAGAAAAGGGGATTAGTAGAATTCGTTCCAAGAAGAATGAGCTGCTATTTGCAGAAA TTGAGTACATGCAGAAGAGGGTAATTATTTCTTTGTATTCATCTTCTAAAATTTTTAATTAGATTTTCACATTCATGTATCTTTGCCATCTCTGTGGAAC TTAATTAGTTTTGTAAAATTTAATTAATAATATATCATTTTGCTTTATGGCTGTGTTATAATTGGCAAGTTGGCAACACTTTGCAATTGAAGTGTGTCTG ATTATTTATAGCTATAGGGTCATCCCTGTGGCATCTGATAGGGTTTGGAAAACTGAATTTAGGCATCCTAAAATATTCCAGATGGTTTTGTCTTCCTCAT GACAAACTATATAAGACGTATAAGATTTCACTAAATCCTAGAAACACCAAAATGTCATGTTTCAATTCTTGGAAGCAATATTTGTTGGAAGCGACATTTA TACATCCCGAAAGGGATTAGTACCTTATCCAAAAGGTGAGACATATTCTTTGAAATACAAAAAATTGCATATTCCCCCAAATGACATGAAGATACTTTTC TTGATTCTATATATTCCTTGCACTTAAAGCAGCTTGTTAAGAAAAAAAATTTGGTGCCTAGGTTATTTGTAATTAACAAAATAATATATATTAAGATAAG AGTACATCAATTTGGGGTTGAGCACCCCCTTGCACTCATATTAATTCTTTTTTCCATTTCATATATATATATATATATATATATTAAGATAGAAGTGCAA GGATTACTCTAGCCCATTTACATGATATTGGATTATTACACAGTCAGAAAAAATGGAGGTGCCTATAACTGTATTTTATTTTTGCAAGTATACCAGAATT CCTCTTGAGTCTTGATTACCTTGAATGGCTTTCAAAGTATATATATAATGTTACAGGAGATAGACTTGCATAATAACAATCAGCTTCTTAGAGCAAAGGT CTGTGTTACTTTCTGTCATCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_156116; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441824
| Blastp | Floral homeotic protein AGAMOUS from Nicotiana with 81.82% of identity |
|---|---|
| Blastx | Floral homeotic protein AGAMOUS from Nicotiana with 81.82% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107812878) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462650.1) |
| Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |