Id Trinity | TRINITY_DN47857_c1_g1_i5 |
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Name Transcript | Ll_transcript_441826 |
Sequence | TCCATTTTGTTTCCTCTCTCCAGGTTAGTGAGCAAATAATACTGAAACATCATTTGAAGTCCCTTTTTCAGTGCTTCACCTCTTTTAGGATCAACCAACC TTTTCACTTAAAAAGTAGATTTAGCAACAGAAGCTCTAGTAGATTGTAAGCTATTACAAGCAAATGAAAAAAACTGGAGCTCTAATGATTTTAATGTTGA GGGCTTAAAGGGTTGAAGAGGCTATAATTAGATTCCAAGTTTCCATTTTTTTTCCTTTTCAGATTTCTTCTATCAGAGAAAACTTACTCCAGGATTGAAA TTTTCTCATGCTATGGTTTTTGTAAAAATATACTCTTTTTTCTGTGGGGGATTGAAATTAAAATTGATGATGTTTAATCTTCACTTGATATTCAGCTTGG AACCATGGTTTTTCCAAACCAATCCATGTTAGTTTCTGACCAGAGAAAGATTAATGGAAGGGGGAAGATTGAGATTAAGAGGATTGAGAACATCACCAAT CGCCAAGTTACCTTTTGTAAGCGCAGAAATGGATTGCTGAAGAAGGCATATGAACTTTCTGTTCTTTGTGATGCAGAAGTTGCTCTAATAGTCTTCTCAA GCCGTGGCCGCCTCTATGAATATGCTAACAATAGTGTTAAAGCATCCATTGAAAGGTACAAGAAAGCAAATTCAGATTCCTCTAGTGCTGGATCCACTTC TGAGGCTAATGCTCAGTTCTACCAACAAGAAGCTGCCAAACTGCGCGTGCAAATCAGTAACCTGCAGAATCACAACAGGCAAATGATGGGTGAGGCTTTG AGCCCTATGAACGCCAAGGAACTTAAAAGCCTTGAGACTAAATTAGAAAAGGGGATTAGTAGAATTCGTTCCAAGAAGAATGAGCTGCTATTTGCAGAAA TTGAGTACATGCAGAAGAGGGAGATAGACTTGCATAATAACAATCAGCTTCTTAGAGCAAAGGTCTG BLAST |
Tissue | pods |
Gene name | LI_gene_156116; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_441826
Blastp | Floral homeotic protein AGAMOUS from Lycopersicon with 82.58% of identity |
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Blastx | Floral homeotic protein AGAMOUS from Nicotiana with 82.58% of identity |
Eggnog | Transcription factor(COG5068) |
Kegg | Link to kegg annotations (543840) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462646.1) |
Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |