Ll_transcript_442062

• Id Trinity: TRINITY_DN47867_c2_g2_i17
• Name Transcript: Ll_transcript_442062
• Sequence: TTTGTGTCTAAGGTTTCCAAGTCGCATAAAGGGATGATAGTCGTTAGATTGTGTAGGAGGCGGGAGGGTTTTGATGGGCAAGTTTTTTAATTTTATATGT ATGATTTTTTTATTGGTGTTTTGTTTGTTTGGTTGGAAAATAGGAGAAACTGAAGCTAGAAATGAAGATAAAAATTGGATTTTAATTTTTTTGGGGTGAA GTGTGTAACTCATGTGCCAAGGTTGCGAAGTTCCATAAATGAACAATTGTTGTTAGTTCTTGTTGCTGGTAATAACGTTTTTTTGGGAAAGTATTTGGTT TAACCGTAAAACGACATATTTAACAAGTGTTATACTTGACACTTGTACACGAGCTCATGTTTTACATTTTGAATCCCCTTTTTCGACCTGAGGTAGGATC TGATTTTGGTAAATTAGGAATTTTGGATTATTGTGGGGTTGGAATGGTGGGGAGTGGGGAAGAAGAGCGACTCATGCTAAGAATGAGAATTTTAAATAAC ATTTTGGAGTAATGCTATACCATCATCACTATTGTTATCATTACTACAAACTTTTTGGTTCACATTTTTGTTAATTTATCTCATAATTTTGTGATGCTTC GAACGTTATTTGGCAGGCTATAAAGCATAGAGAATACAGACAGAAGATAATATCAAATTATCAGCCTCAAAATCGGGAGTTGTACACTATAGATCCTACT AAGTTCTTTGTTCCAGCATTTCTGAAAGCAATTAATGATAATACAGAACAAAGCTTTAGACGTATAGTGTCCGAGCCCTCCCCAGGCATTTTCGTGTTTG AAATGCTTCAGAAAGACTTCTGTGAGGCTCTGTTAGAGGAGATTGAGAATTTTGAGAAGTGGGTGACTGAAGCAAAATTTCGAATCATGCGCCCCAACAC AATGAATAAATATGGTGCTGTACTTGATGACTTTGGCTTTGAAACAATGCTTGACAAGCTTATGGAAGGTTTTATTCGCCCTTTATCTAGAGTGTTCTTT GCCGAAGTTGGAGGATCGACCTTGGATTCACATCATGGATTTGTTGTTGAATATGGTCAAGATAGAGATGTTGACTTGGGTTTCCATGTGGATGATTCGG AAGTAACCTTGAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAGTTGTTTTTTCGGGGAACACGATGTGAGAAACATGTCAATACAGGAACTCAATC AGAGGAGATCTTTGATTATTCCCATGCCCCTGGACAAGCTGTTCTTCACCGTGGTCGCCATCGCCATGGTTCTAGAGCTACTACATCTGGTCATCGGATC AACCTACTTCTGTGGTGCAGAAGTTCTGTCTTCAGAGAGATGAAAAGGTATCAAAAAGATTTCCCTAGCTGGTGTGGTGAGTGTAATCGTGAGAAAAAGG AAAGGCAGCGCTCCTCAATTGCTACCAGATTGGTAATTCTTTAACTAATTTGAATTCGTCATGTACACACATTACTATGCCAGTAAGTTGGTATTCGATT TATGCATAACACATGCACATATATCGTTCACCTGGATTCCAATCATGTGATAAGTATAGTCTTGGTCAATTGCTGCTAGCCTGTTACCAAGGTATATTAC TGTTTACATTAGGTGTAGGACAGGGGAACTGTGTAAAACTTGTGTTGAAATATACAGGGTTATTATATGATATACTAGCTTAGCGTTGAAACTTGAACAT ACCCCAAAAGTGAATATGAACTGCGGTGAAAAGGAGAAACCGAATAATAATTCATATGCATACATGGAAACTAAAATTGAGTTTTAAAGGAATAAAAAAA AATTGACCCTGCAAATTTTCATGTTGAGATGGCAATCTATTTATCAAATATTGTATGAACTGCTAAATTGGTAAAGCTAGTGTCTGCTGTGCTATTTACG TCATGATTTTTCATATGAAGTAGCTGTTACGAAGTATACAATCAGAATTGATAATTTTTTTAATAAATATCAAATCATGGTTTGGGCTTTTTTAATTGAT TCTTTTATTATTAAAAAAAGTAGCTTGCTACCCACAGAATATATGTTTCCAACGGTTACTTAAGTGTTTGCTGACTTATTTTCGTTCTCATACTGTATGT TTTGAAATGCATGAATGAGATTGTTGAGTATAATTACCTGTTTTTATGGTATTACAGGACATGTTCAGGAGGGAAAGTG
• Tissue: pods
• Gene name: LI_gene_156211;
• Additional information: details;

Expression of Ll_transcript_442062

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.2
• PS2: 0.3
• PS3: 0.3
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442062

• Blastp: Uncharacterized PKHD-type hydroxylase At1g22950 from Arabidopsis with 66.67% of identity
• Blastx: Uncharacterized PKHD-type hydroxylase At1g22950 from Arabidopsis with 63.2% of identity
• Eggnog: Procollagen-lysine 2-oxoglutarate 5-dioxygenase(ENOG410Y4QU)
• Kegg: Link to kegg annotations (AT1G22950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436708.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;