Ll_transcript_442049

• Id Trinity: TRINITY_DN47867_c2_g2_i4
• Name Transcript: Ll_transcript_442049
• Sequence: AATACGTAAGACGAAGTTAAGATTCCCAAACTTTAATAAAACCGAAATATCTTTGTCCAAACATAAAAACCCTAACTTCCCAAATCCATTTTCATTTCAC CTCAAAAACCCTAAATTCCCATCAATTCCATGATCTAGACCTCAATTCCAAATCATCAATTCAGGCAATGTCGCTCCAAAGTAGCTCCAGTGACAACCCG GAAAGTCAATCACCGGCAACCGGAGGAAATGGTGCTAGAAACAAAGGAAACGGCACCGTTTCGTCGAACATGAGGCTGAAACTGAAGCCTAGCAAGGAGC ATGAACCAGATGATTACGAAGATATGGAATTGGAATACAGCGCTGCTCTCTTGAGCTCCCTTGAGATGTATCTTCCTTCTAACATGCTCAATGATCCTCG CCAGCAAAAGGCCAAGTTCATGCAAGACATTTTGACCAAGTATCTCCCTCCTGGAGAGCGTAGAAGAGCTATAAAGCATAGAGAATACAGACAGAAGATA ATATCAAATTATCAGCCTCAAAATCGGGAGTTGTACACTATAGATCCTACTAAGTTCTTTGTTCCAGCATTTCTGAAAGCAATTAATGATAATACAGAAC AAAGCTTTAGACGTATAGTGTCCGAGCCCTCCCCAGGCATTTTCGTGTTTGAAATGCTTCAGAAAGACTTCTGTGAGGCTCTGTTAGAGGAGATTGAGAA TTTTGAGAAGTGGGTGACTGAAGCAAAATTTCGAATCATGCGCCCCAACACAATGAATAAATATGGTGCTGTACTTGATGACTTTGGCTTTGAAACAATG CTTGACAAGCTTATGGAAGGTTTTATTCGCCCTTTATCTAGAGTGTTCTTTGCCGAAGTTGGAGGATCGACCTTGGATTCACATCATGGATTTGTTGTTG AATATGGTCAAGATAGAGATGTTGACTTGGGTTTCCATGTGGATGATTCGGAAGTAACCTTGAATGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAGTT GTTTTTTCGGGGAACACGATGTGAGAAACATGTCAATACAGGAACTCAATCAGAGGTGGTTGTACACTTTTTTTATGGAGTCCCTTATTTGAAAGCAGGA GATCTTTGATTATTCCCATGCCCCTGGACAAGCTGTTCTTCACCGTGGTCGCCATCGCCATGGTTCTAGAGCTACTACATCTGGTCATCGGATCAACCTA CTTCTGTGGTGCAGAAGTTCTGTCTTCAGAGAGATGAAAAGGTATCAAAAAGATTTCCCTAGCTGGTGTGGTGAGTGTAATCGTGAGAAAAAGGAAAGGC AGCGCTCCTCAATTGCTACCAGATTGGTAATTCTTTAACTAATTTGAATTCGTCATGTACACACATTACTATGCCAGTAAGTTGGTATTCGATTTATGCA TAACACATGCACATATATCGTTCACCTGGATTCCAATCATGTGATAAGTATAGTCTTGGTCAATTGCTGCTAGCCTGTTACCAAGGTATATTACTGTTTA CATTAGGTGTAGGACAGGGGAACTGTGTAAAACTTGTGTTGAAATATACAGGGTTATTATATGATATACTAGCTTAGCGTTGAAACTTGAACATACCCCA AAAGTGAATATGAACTGCGGTGAAAAGGAGAAACCGAATAATAATTCATATGCATACATGGAAACTAAAATTGAGTTTTAAAGGAATAAAAAAAAATTGA CCCTGCAAATTTTCATGTTGAGATGGCAATCTATTTATCAAATATTGTATGAACTGCTAAATTGGTAAAGCTAGTGTCTGCTGTGCTATTTACGTCATGA TTTTTCATATGAAGTAGCTGTTACGAAGTATACAATCAGAATTGATAATTTTTTTAATAAATATCAAATCATGGTTTGGGCTTTTTTAATTGATTCTTTT ATTATTAAAAAAAGTAGCTTGCTACCCACAGAATATATGTTTCCAACGGTTACTTAAGTGTTTGCTGACTTATTTTCGTTCTCATACTGTATGTTTTGAA ATGCATGAATGAGATTGTTGAGTATAATTACCTGTTTTTATGGTATTACAGGACATGTTCAGGAGGGAAAGTGAATCTACTGCATAATATTTTGCTCACT GGATTGTTATAAAATGTTATAGATGTGATCATTAGTCAGGACAATGAGCCTATGATTATTGATCCAGGTGTGTGTACAAGTTATTTGCTGGATTAGATGG TTTTCTTCAAATAAGCTTTTGGATTTCCCACTGACAATTGTTGTTTATATAATGCCTATTCATAGTGTATGTGAGCTGGTTTAATGCTTCATTGACCACG TTGATTTTTAATGCATGAAATCACAAATATCATGGTCAGCAGTATACTCATTCATTAATAGTTTTATATTGGCTGTAACTATTATTTTATTTTTGTGGAG AAGTTGAGCTTTGACATAATGGAAGTTTGTTTAGTGATCATGGTTTCTTTAGTTGAGGAAACTTCACTGAGTGAAGTTACATATATTTTATGGTTTTGTC TGATCGTTTCATATAATAGAGATTCGAGAAAGTTTTATGTTGACTATTGGTTACTTTTAATCGAGATTTAGGATAAAGTTTTATGTTAGTTGTCTATCCA TATAGCATTTAGTGACCTTCTGTTTCCTTTTTCTTCATGTAACTCCTTGACCTTGAGTAGCATGTTTGGAG
• Tissue: pods
• Gene name: LI_gene_156211;
• Additional information: details;

Expression of Ll_transcript_442049

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.5
• PS2: 0
• PS3: 0.1
• PW1: 0.4
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442049

• Blastp: Uncharacterized PKHD-type hydroxylase At1g22950 from Arabidopsis with 56.03% of identity
• Blastx: Uncharacterized PKHD-type hydroxylase At1g22950 from Arabidopsis with 56.03% of identity
• Eggnog: Procollagen-lysine 2-oxoglutarate 5-dioxygenase(ENOG410Y4QU)
• Kegg: Link to kegg annotations (AT1G22950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436708.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;