Ll_transcript_443189

• Id Trinity: TRINITY_DN47874_c0_g2_i2
• Name Transcript: Ll_transcript_443189
• Sequence: TATCTTTATGTCTTTCTTTCATTTTATGCATGTTTCTTCTCATTTCTCTGTCAAAAATCTCTTTTTTATTTCTATCTCCCTTTTTCTCCTGAAAGTTATG CTTCCATTAATCGTTTTTTTCTCTATTTGGAATTGGATCTGTGTGTGGTTTAAAGGGGATTAGTTCCCAGATTTACTTTTATACTATTTTTCTGAGGTTT AAAATATGGGTCAATATTAAGGTTTTGAGAGCTTTGAAATTGTTTTTCTATTATGCAATTAATAGTTTCTTCATCATATTATTTTTTTTATTTGTGCCTT ATGTTCCTGTAATTCAATTTATAGTTTGCATTTCTGTCTTTTTTCTCTTAATCTATGTCCCCTATTGTTTTGAAGAGTTGAAAACAAGTGAAAGTTTAAT TTTTTTTCCTTCACAACTCTCCCAAAATGAAGAGAAGTGAAAGTTAGTTTAGGGCTTTAGGCATTAATGCATTATATATTTTATATTAATATTGTTGTTA TGATATATAAAAGAGTTCAATTTTGATCAATTGCTTTTTTTCCTGCATTACTCAATTTTGAGCAATTGTTTTTTTACTGCGGATGGACCTCATTCATATT CTTTAGTTTGTGTTTTTAGTTTCCGATGTACCAAAAAAACTCAAGCATTTGTTTTGTTATTCTTTGTGAACATTTTCAATTCCATGTTTTTGTGCTTGAC TGACAACAACCAGTTATCCAGAACCGAGCCCGCGCAAAATGAGTTCAAGAAGAGGAGCAAATGGAAGACCTTTTCCAGGCCCCAAACATGATGGTTCTTC TTCCAAAGGGAAAGGAATAGCCGAGCCTCGACCAAAAATTGAGCAGTTGAGTCAGGGTCTTCTTGATGTTAACATAGGCCAAGAACAAGATGATGGTGAA TGGGAGGTACAAGCAAGGAAACCCAAAAACCGAGCTGGGAGCGGTTCTGCAAGACAATGGGGTCCTCCAGTTCATAATTCTAATCCTAGAGGAGCCGGGA ATGTAGGAATGGCTCAAAGGCAAGGCACTTGGAATCATGGAGGAGTTGGAAGGGCTTCTGGAAATCCTAGGCAGACACAAAATGGCGACTTCAGGAGACC CGTTGGCAGAGGAAATGGAAGGGCTCAGTTAACTACAAACGGACCTAAGGGATCCAATGTGAATCCGAATCCATTAATCCGACGTCCTCTTGAGCACGGG TGGGATTGGCAATCTAGAACTGGTTATCAGCCGTCTGATGATATTAGCCAGGTAACCGACGAAACTGCACCGGATTCCCCTCTGAATAATAGTGATGTGG ATGATGAAGTGGAGGAGGGCTTTGATGATATGGAAGATACTGATGATGATCTGATGAGTGATGACTATGATTCTGATACTAGTCAAAAGAGCCATGAGAC TCGTAAGAAGAGCAAGTGGTTTACGAAATTTTTCGCGATTCTGGATACCCTAACTGTTGAACAGATCAATGAACCTGAAAGGCAGTGGCACTGTCCAGCT TGTCAGGGTGGTCCTGGTTCTATTGATTGGTACAAAGGTCTGCAGCCTCTGCTTAACCATGCCAAAACAAAAGGGTCAAAAAGGGTGAAGATCCATAGGG AGCTTGCTGTAATTTTAGATGAGGAATTACGCAGAAGAGGTACTTCCGCAATTGCATCTGGAGAAGTATTTGGTAAATGGAAAGGTTTAAAAGATGAGGA GAAAGATCACGCAATAGTTTGGCCTCCAATGGTTGTCATTCAGAATACACAGCTTGAACAAGATGAAAAAGAGAAGTGGATAGGTATGGGTAACCAGGAG CTTCTGGATTATTTTAGCACATATGCTGCTGCGAAAGCTCGACACTCTTATGGCCCACAGGGTCATCGAGGGATGAGTGTTTTGTTATTTGAACCCTCAG CTACAGGTTATTTTGAGGCAGAACGTCTGCACAAGCATTTTGTAGATCAAGGAACTGGCCGAGATGCTTGGATTGGACGCCGAAGGTTATTTCTCCCAGG TGGACAGCGTCAGCTCTATGGATACATGGCTGTAAAAGAAGACTTGGATTTATTCAACAGGCATTCTCAAGGTAAGTCTCAGCTCAAGTATGACATGAAA TCATTCCATGAGATGGTAGTAAAAGAAATCCGGAAAATGGGTGAGGACAACCAACAGCTTCACTACTGGGTAAACAAGGCTGTCAAAGGCGAAAAGCACA AAAAAGTTCTGGAAGAATCTTTGGAGATAATGGCTGAGAGACTGCGGCAGACATCGGAGGAAAGTCACATTGTAAGGCTGAGAACGAAAAAACAACACGA AGAAAATAAGGAAGAGGTAATGCTAACATCTGACAAACTTTATGGGGATGTTCCATCCTCAATTCGATTTTCCTTCTCGTTAGCCGCCATTGTCACTAGT GTATCTTTCTAGGTTACAACATATATCTCTTCTGCTTTTTGTTACCTTTTCTAACCACTGTATGTTGTTTCTCAATGAAAGATGTACATGCAAGAACAAT TTTTTAAGGACCAGATCAGAATCATTCATGATTCAAGGAATGCAAAGGAAGAATATTTTGAGAGGCTGCAGCAGGAGAAACGTGAGGAGGTGAAGCAGTC AAGTACCGGTCCTTTAAATGCAACGCAACAGGGAGTCAAGGTGGATGAATATCGAAAATTTGTTGAGATCCAAGATAAAGAAATGGAAATCTATGTTGCT GAAGAGGAGAAACTCCGCCGAGCTCATGAAGACAATATTGCTGCGATGAGGCTGAGGCATTGGGCGGAACAGGTGCAGATGGAGAAAAAGTTCAACGAGG AACTGGCCAAGCTCATGGAAAAATTCTCCCCGTATCAGGCATAAACCAATTCCAGTGGTATCAGATTGTAGGATGTTGCACAGGTGCATACAAACAGATA AACACATCAAAGAAGATAGAGATGATAAATATTGCTCTTAGTTGAAAACCACATACATCAGCATTTAGGAACCCAAAGTTATAAAACTCTGTATTTCCTT CTTTTGAGATTGTAAGCTGGCTAAAATTGTGATGCTAATCCATTTTTTCTGATCTTTGGTACTATTGGCTAGAAATCTGATATGATTGATCTTATTGTGT TTTTTCTTACAAATTTTATGAATAATTACCAAACTTATCTCCAAAGAATTGCCTGACTCAATATTAGGATAATTTTCAACCATTTTTAGTTGTTTTCAAA AGAGATAAATGTTTGTGTTTGTTATTTGA
• Tissue: pods
• Gene name: LI_gene_156256;
• Additional information: details;

Expression of Ll_transcript_443189

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443189

• Blastp: Protein SUPPRESSOR OF GENE SILENCING 3 from Arabidopsis with 52.91% of identity
• Blastx: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 45.33% of identity
• Eggnog: Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45)
• Kegg: Link to kegg annotations (AT5G23570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458108.1)
• Pfam: XS zinc finger domain (PF03470.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;