| Id Trinity | TRINITY_DN47874_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_443195 |
| Sequence | AATTGTCTTGTGACCTGGAGGTCATAGGTTCAAGTACTAGAAACAGCCTTTTCTCTTGACAGAGTAAGACTATGTGCATCTACCTTCCTCAAACTCCACT AGGTGGGAGCCTCGTGCATTAAGTTGCCCCCCTTTTTCTTGTATTAATATTGCAAAACATTCTTAATTTACCTAACATTCTTGTTTTCTGTGTTAAATCC ATGTTTTCTTTGTAATTATAGTGGATAGGTATGGGCAATCAGGAGCTTATAGATCACTTTAGTACATATGCTGCTGCAAAAGCTCGACACGCCTATGGCC CACAGGGTCATCGAGGGATGAGTCTTTTGATATTTGAAAAGTCACCAATAGGTTATATTGAGGCAGAGCGTCTACACAAGCATTTTGTAGATGAAGGAAC TGGTCGAGATGCTTGGCTTGGTCGCCGAAAGTTATTTCTCCCTGGTGGACAGCGTCAGCTTTATGGATACATGGCTCTAAAAGAAGACCTGGATTTATTC AACAGGCATTCTCAAGGCAAAACTCAGCTTAAGTATGAGATGAGATCATACCAGGAGATGGTAGTGAAAGAAATTCGTAAAATGGGCGAGGACAACGAAC AACTTCACTACTGGATGAACAAGGCTGAAAAATGCGAGAAAGACAAAAAAAATCTGGAAGAATCTTTAGGTGTAATGGCTGAGAGAATGCGACAGACAAT GGAAGAAAGTCACACCGTAAGGCTTAGAACCAAAAAGCAATACGAGGAGAATAGTGAAGAGTTGTACTTGCAAGAACAATTTTTCAAAGACCAGATCAGA ATCATTCATGATTCAAGGAGTGCAAAGGAAGAAGATTTTGAGAGGTTGCAGCAGGAGAAGCGCAAGGAGGTGAAGCAGTCAAGTACCAGTTCTTTAAATG CAAAGGAACAGAGAATCAAGGTGGATCAATATGAAAAATTTGTCGAGATTCAGGATAAAGAAATGGAAAAATATGTTGCTGAAGAGGAGAAACTCCGCCG ATCTCATGAAGACAATATTGCTGCAATGAGGCTGAGGTATTTGGAGGAAGAGGTGCAATTGGAGAAAAAGTTCAATGAGGAAAAGGCCAAGCTCATGGAA AAATATGCCCCATCCCGGGCATAAACAAATTCCATTGGTATCTGATTGTAGGATATTTTACAGGTGCATTCAAACAAATAAATACAGCAAAAAAGACAGG ATAAATGGATAGAGTGGTTATTCTTAGTTGAAAACCACAGACATCAGCATTTTATGAATTGGGAATTAAAAAAACTATATTTATGTTTCTCCTTTAGTAC ATGGAGACAGTGACTTCTTTTTGGATTGAAAGCTTGCTAAAATAATGATAATGCATCTTTGCTGTTCTTTGATACTATTGGCTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156256; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_443195
| Blastp | Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 56.57% of identity |
|---|---|
| Blastx | Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 57% of identity |
| Eggnog | Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45) |
| Kegg | Link to kegg annotations (100134882) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462773.1) |
| Pfam | XS domain (PF03468.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |