Ll_transcript_443198

• Id Trinity: TRINITY_DN47874_c0_g2_i7
• Name Transcript: Ll_transcript_443198
• Sequence: GAATGATAGGATTGGAATACACTCTTCCTTCGGCAGTGTTCTCAAAGGGTCTGTAAGCTGAAAAGAGTAAGAGTTTTGGATCCTCAGAATCAGAATCACT CTCTTTCGTTTCAACCGCTGAGTCCACCATTCAGGCCGAGCTACTTGGTAAGGGTTTTGCGAGTTTGTTTCGGGGGAAAGAGAAGACCGCAAGACATCAC TCCTGAGCCATATCTTTCTATTTTCCCCCGAAACTCAACTCGAAACTCAACTCGCAAACAAACATATACTAATTGGGTTTAACTGCCCGGCCCATTTTCA ATTCATCTAAGTAAATTGGGAGCATTTACGGCTTTACCTTAATATGGAAATGTAATCGAGATGGCGGTATTGGAGATATACAAATTACAACGAGGCATTA GCTGTTACTTCTTTTAGGGTTCATTTTCGTGGATGATGTTATCTATCACTACGCCAAGGGAATACTTCATGGATTTCATTTGTCAAATAATGATTGTTGG AATAACAAGTGGAAGAGCTTTAAGTTTTTTGCATAATGAGGGTTTGTACACATCAATTTGTGTCAACAACAATGTTATTTTGTTTGATGCTGCTGGAAAG TTGGTTTTGTTTAGAACAGATCAATGGAATCGGGAAAATCATATCGACGATTCCTTGGCAAAAATTTTGTCTCTAAGGTTCATAATTGTGTATCACTTAT TTAAGGAATCTAGACCAATTGTGGTTGGACAAAGAAGGTTCTAGAGTTAAAAGAACAATGCCCAATAGGCCCAAATATGATGAAAACACACGCCAGATAC ACTGTATATGTATATGTATATGTGTATATATATATATTGGTGGCTAGGACTCAGCAGGTTGAGCTGAAAGAAAAATATTCCTTTTGTCCAAATCAACTTG AAAAATTCTCGTTCAATATCTTCTCTGCTACTCTGCCGCTGCTGAATTTGCTACCGATCACTGAGTTATCCAGAACTGAGCACGTGCAAAATGAGTTCAA GAAGAGGAACACCTGGAAGACCTTTTCCTTCCTCTAAAAATGATGGTTCTTCAACTTCCATGGGGAAAGACATAGCTGAACGTGGTGGTTATTCTTCCAA AGAGAAAGTAATAGCTGAACCTCAACCAAAGGTTGAGCAATTGAGTCAGGGTCTTGTTGATATTAACATAGGCCCAGGAGAAGATGACGGTGAATGGGAG GTACAATCAAGGAAATCGAAGAACAGAACTGGAAACAGAACTGGAAGCAGTAGTGCAAGACAATTGGCACTTCCGGTTCATAATTCCAATCCTAGAGCAG CAGGAAACACAGGGATGGCTCAAAGGCCAGGCACTTGGAATCATGGAGGGGTTGGAAGGGGTTCTGGAAATCCATGGCAGACACAAAATGCTGACTTTAG GAGACCTGCTGGCAGAGGAAATGAAAGGCCCCAGTTCACTGCAACTGGACCTCAAAGCTACAGTGTCAGTTCATATCCGTTAATTCGGGCTCCTCTTGAG AAGGGGTGGAATTGGAAATCTAGAACTAGTTATCAGCAGTCTTTAAGTGGTGATGCTAGCAAGGTAACTGATGAAACTGCACTGAAGTCCCCTGAAAAGA ATAGTGACGTTGATGATGAAGTCGAGGAGGATTTTGATGAGATGGAGGATACCGATGATGATCTGCTGAGTGATGATAATGATTCCGATAGTAGTCAAAA GAGCCACGAGACGTGTAAGAGGAGCAAGTGGTTTAAGAATTTCTTTGCAACGTTGGACACCCTGACTATGGAACAGATCAACGAACCAGATAGGCAGTGG CACTGTCCAGCTTGTCAAGGGGGTCCTGGTTCTATTGATTGGTACAGAGGTCTACAGCCTCTGATGAATCATTGCAAAACAAAGGGGTCGAAAAGGGTGA AGATCCATAGGGAGTTTTCTGTAATTTTAGATGAGGAATTACACAGAAGAGGTACTTCAGTAATTCCAATTGGCGAAGTATATGGGAAATGGAAAGGTTT AAAACATGGGGAGAGAGATCATGAAATAGTTTGGCCTCCGATGGTTGTCATTCAGAATACACAGCTTGAACAAGTTGAAAATGAGAAGTGGATAGGTATG GGCAATCAGGAGCTTATAGATCACTTTAGTACATATGCTGCTGCAAAAGCTCGACACGCCTATGGCCCACAGGGTCATCGAGGGATGAGTCTTTTGATAT TTGAAAAGTCACCAATAGGTTATATTGAGGCAGAGCGTCTACACAAGCATTTTGTAGATGAAGGAACTGGTCGAGATGCTTGGCTTGGTCGCCGAAAGTT ATTTCTCCCTGGTGGACAGCGTCAGCTTTATGGATACATGGCTCTAAAAGAAGACCTGGATTTATTCAACAGGCATTCTCAAGGCAAAACTCAGCTTAAG TATGAGATGAGATCATACCAGGAGATGGTAGTGAAAGAAATTCGTAAAATGGGCGAGGACAACGAACAACTTCACTACTGGATGAACAAGGCTGAAAAAT GCGAGAAAGACAAAAAAAATCTGGAAGAATCTTTAGGTGTAATGGCTGAGAGAATGCGACAGACAATGGAAGAAAGTCACACCGTAAGGCTTAGAACCAA AAAGCAATACGAGGAGAATAGTGAAGAGTTGTACTTGCAAGAACAATTTTTCAAAGACCAGATCAGAATCATTCATGATTCAAGGAGTGCAAAGGAAGAA GATTTTGAGAGGTTGCAGCAGGAGAAGCGCAAGGAGGTGAAGCAGTCAAGTACCAGTTCTTTAAATGCAAAGGAACAGAGAATCAAGGTGGATCAATATG AAAAATTTGTCGAGATTCAGGATAAAGAAATGGAAAAATATGTTGCTGAAGAGGAGAAACTCCGCCGATCTCATGAAGACAATATTGCTGCAATGAGGCT GAGGTATTTGGAGGAAGAGGTGCAATTGGAGAAAAAGTTCAATGAGGAAAAGGCCAAGCTCATGGAAAAATATGCCCCATCCCGGGCATAAACAAATTCC ATTGGTATCTGATTGTAGGATATTTTACAGGTGCATTCAAACAAATAAATACAGCAAAAAAGACAGGATAAATGGATAGAGTGGTTATTCTTAGTTGAAA ACCACAGACATCAGCATTTTATGAATTGGGAATTAAAAAAACTATATTTATGTTTCTCCTTTAGTACATGGAGACAGTGACTTCTTTTTGGATTGAAAGC TTGCTAAAATAATGATAATGCATCTTTGCTGTTCTTTGATACTATTGGCTAAAAA
• Tissue: pods
• Gene name: LI_gene_156256;
• Additional information: details;

Expression of Ll_transcript_443198

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 2.8
• PS2: 3.9
• PS3: 4.8
• PW1: 0.8
• PW2: 1.2
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443198

• Blastp: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 50.32% of identity
• Blastx: Protein SUPPRESSOR OF GENE SILENCING 3 from Lycopersicon with 49.05% of identity
• Eggnog: Protein SUPPRESSOR OF GENE SILENCING(ENOG4111E45)
• Kegg: Link to kegg annotations (100134882)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463555.1)
• Pfam: XS zinc finger domain (PF03470.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;