Ll_transcript_443542

• Id Trinity: TRINITY_DN47876_c0_g2_i3
• Name Transcript: Ll_transcript_443542
• Sequence: TAAAAAACAGAGTCTTATATCGTTGGTCGTTGTAACCACTGACTCGCTCACTCACTGACTCGGTCACTGACTCAGTCCTCGTTAGTCACTCTCTCACGCG CCACCGTGCCTAACCACACAATGCAGCAGATTAACGCCTCTTCTTCTTCTTCCGACGAAGAAGACGATGATCGCCACAACCTCATTGACCAAAACGGTAG AAAACCTTCTTCCACTTTCCACATCGAAGATTTCAACAATTTCGCATCTCGATTCCATTGCACATGTTTCACTAATCTCAAATCCAAGTTCCAAAAGCGT TACCTATTCGCTCTTCTCCCTCTCTTCTTCATAATCATATTCTACCTAACTTCGAATTACTCAACTACACGTTTCAATCTCTCTCCTCTCTTCAATTCCA ATTCCAATTCCGATTCCAGAACCAGAGAATCTGAATTACAAGCACTTTACCTCTTGCGAAAACAGCAATCAGGGCTTCTTAAATTGAACTCGATCATAAA CCCTAATTCAACTGAGGAGGATCTTAAATCTGTTTTGTTCAACCAGATTTTCCTCAACAGAGAGATTCAACAGGTTTTGCTAAATCCACATAGAAATGGC AACAACTTGATTGAACCTGAATTTGATTTTGGGAATGATAGGTGTAGAACAGTGGATCAGAATTTGTCAAATAGAAGAACAATTGAGTGGAAACCTAAAG CTGATAAATTTTTACTTGCTGTATGTGTTTCTGGACAAATGTCTAACCATTTGATTTGTTTAGAGAAACATATGTTCTTTGCTGCACTACTTAACAGGGT TTTGGTTATTCCTAGTTCCAAAGTGGATTATCAGTATGATAGAGTGTTAGATATTGATCACATTAATAAATGCCTGGGAAGAAAAGTGGTAATCTCATTT GAAGAGTTTTCTAGTGTTAAGAAGAATCATTTGCATATAGACAAGTTCTTGTGTTATTTTTCATTGCCTAAACCATGTTATTTAGATGACGAGAGGTTGA GGAAGTTGAAGTCTTTGGGTCTGTCGATGAGTAAACCTGTGCCTATTTGGGATGAGGATATCAAAAAGCCAAAGCAGAGGACGGTTCAAGATGTTATGTC TAAGTTTAATCATGATGATGATGTTCTTGCAATTGGGGATGTTTTCTATGCTCAAGTGGAGCAAGAGTGGGTGATGCAACCGGGTGGTCCCCTTGCTCAC AAATGCAAGACTTTGATTGAACCTAGCCGTCTTATTTTGCTTACTGCTCAACGTTTTATTCAAACCTTCCTTGGAAGGAACTTCATCGCCTTGCACTTTC GAAGACACGGCTTTCTGAAGTTCTGCAATGTCAAAAAACCAAGTTGCTTTTATCCCATTCCTCAAGCTGCAGATTGCATCTCGCGCGTCACTGAAAAGGC CAATGCACCTGTCATTTATCTTTCTACGGACGCAGCAGAAAGTGAAACTGGTCTACTTCAGTCACTAGTTGTGCTTAATGGCAGGCCTATTCCTCTTGTT AAACGCCCAGCTCGTAATTCAGCTGAAAAGTGGGATGCTTTGTTATATAGGCATCATATCGAGGGAGACCCACAGGTGGAAGCTATGTTGGACAAGACTA TATGTGCCATGTCTAGTGTGTTCATCGGAGCCTCTGGTTCAACATTCACGGAAGACATCCTGCGGCTAAGAAAGGACTGGGGATCAGCATCGATGTGCGA TGAGTACCTTTGCCAAGGTGAAGAGCCAAATGTTGTAGCAGAAATTGAATGAAGATACATACAAGTGAGTTTCATCTGTATCATGATGATTAGGATTTGT AATGTGTATTTGTGGTGTATGTATGATAATAGGATATTAGAATTAGCTTTGGGTTCATAACTTCTGCTTGTTATATACAGATTCTAACACGTTGAATATG AGTATAGTTTGTATGATTTTTATCCAGAATAAGCAACACCATTAAATAATACACCTTTTAACACATTTTTTCAATATTCTTTCCTATTGCTATTTTTTAT TCCCCTGGAATTCTCAACATTCATGACTTTTACCCAAAGATGAAAGGAAAAGCTTCTGAAGATCTAAAGGTGTGTTCATCTATGACATTACTTGGCTGTT AAAGGGGAAATCATTGCCTTTCAAACTTACCTCATGATAGTTATGTGTAATCTGATAGAGTATTATGACGTTATTTCGATTTAGAGAATAAAGTATCTGT TACACAATGAGATAAATTATCTCCTTAAATCCATCTACTACTTGACATGGG
• Tissue: pods
• Gene name: LI_gene_156267;
• Additional information: details;

Expression of Ll_transcript_443542

FPKM

• PAB: 4.7
• PNAB: 2.7
• PS1: 2.6
• PS2: 2.9
• PS3: 6.5
• PW1: 4.9
• PW2: 3
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443542

• Blastp: GDP-fucose protein O-fucosyltransferase 2 from Caenorhabditis with 28.74% of identity
• Blastx: -
• Eggnog: O-fucosyltransferase 2(ENOG410Y78N)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440481.1)
• Pfam: GDP-fucose protein O-fucosyltransferase (PF10250.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;