Id Trinity | TRINITY_DN47877_c2_g1_i1 |
---|---|
Name Transcript | Ll_transcript_442189 |
Sequence | GTAAATCAGAAATCACTTTGGGCTCTTTTTTGTCCTATAGGAATCCATGTTTAGAGATTCCTTGGGAATATTTTGGGATTTGGAATTCCACTTCACTATC ATGTAAATATGTGTAGGTTCAACAAAATTCAAAAAGAAACAAGTAATTTCATCTGTCAACTTCAATGAAGACAACCTGTTTAAAGCATTTTCCAGCTTTT CATGCAGGCTTTCTTAGCTGGATTTATATATATATAGTCAACAACCAAATCCACTGTTTGATTTTTTGGGATGCTAATGCTAGAATAGACTACAAACTAC TCTTACTTACACTCTTATAACCTTCCCTTTCAAGCACCTTTTTGATATTTACTTCTTACTACTACATCTCCTTGGTATCTATGTAACTTACTTGAGAACC ATGCAAAGTAGGCAGATCAGTGCCATTTGAGAAGATAATTTGATATCTTTACTTCAAAAGCAATAAGCAGAAAATACTGAAGCTGATAGCTCATGAGGAA GTTCATGAGGTAATGCATGATGACAATGAGATTGTTATGGAGATTAAGGTTGCCACTACTCATACTGATTCAACTTTTATACCCCAACAAATCAACCTAC AAATTATATGCTGAGGCTTTGTTCACAATCAAGAGTTCACAACAATTTGGATGCAACATTGTGAATTATCCATGTCAAATACAATGGCCTTGTCTTGACT GCAATAAAATAAAAGATCCAGGTGCTTTTTCTCTAAATTCTCTGTAAGCTCCTTCTCTCGATCTCTCCGAATTTGCGTAAAGTACTCATTCGTTATTAGG ACTGAGGAAAAACATTGAGGGTTTGAGGCTCGACCTAGAACTTATAGTATCGAGCACTTATCACTAGGCCAAAAGTTATAGCTGTTAGTCACGGCCTTAT CTTTCTATTCGACACAATCTCCGACAGAATTTGATTGCTGAGGACGTTGATCATTATGCTCGATAGAACATGCCAGAATTTGTTTGAATGAAACAAATAT GCCCTCTATCCAGAACGGAAAAGACGGTCGAGAATACAGAAAATGAGATAATGACAAACTAGACTAAGATTTTACTACAAGGTGAAAAAGTGTGTACATA AAACATTATTATTGATAAATCAGTAGTATGGCTTATATAAAACTGTAAAGAGTAATTAACCATAATACAGTAATACTAGATGATACAAGAATTCAACTTT TGCTTCAAGTATTTTCCTTGAGAATTCAGCTCAGCTATAACAATCATAAAAAGAAAAGATCTCTATTTGAGAAACAGGTGCAATAACAAGAAAAATAGAT GGGAATAATGACATTCCAACACTTACACCTCTTCAAGATTCACAAGCTAAGAGACCAGAAGGAATAAAGGGTGCTGTCATAGTTGGTGCCATTGTTGCTT CCTTAATTGTTGTCACCATTCTAGTGATTGTCTATATCTGCTTGATGAGAATCAAAAGACTTATAAGACAAACTTCTGAGACTGCTTCTTCTATGCCATC TCCATCTGTTGAGATGGGAAGAGGAAACAACTCAGAGTATGTAAGTGCTTTTACTCCACATTATTCACAGAAGACAAGGCATATAACCATTTTGGAACTT GAACAAGCTACAAGGAATTTCGGTCAGAGTAATATTATAGGTGAAGGTGGATTTGGTTTAGTTTACAAGGGTTTGCTTGAAGATGGATCTATTGTAGCCA TAAAAAGGCGCCAATTTGCTTTGACACCGGATTTCGTCCGTGAGGTAAATATGTAACGAAAAGTCTCTTCCATTTTGTTTTATAAAGCTCTTGCGATGCG CACGGTCCAGGATGGTTTGGTAGACAATCTTACCTTATATTTGCAAGAGACTGATTCCACGACTCGAACATAAGACCTCGTATTCATTCTAACCAAACCC CGAGTTAGTAACTATTCGCGACCGTGCTAGCGCGGCTTAGTCTTCTACACATAACAATGTCTATGTGATACTCTTGTCAATGGATGGCAGGTTAAGCAGA TAACTCACACCCATCACATGCATCTTGTCAAGCTTATAGGCTATTATGAAGATAGGTGCCAACAATTGCTTGTGTATGAATATCTCCCTAATGGCAATGT AGGGAATCACCTATATGATAGTGAAGGTTTACCACTAGGAAGGTTAGACTTGTGGAGAAGGTTATCCATTGCTTTAGGAGCTGCCAAAGGACTTGAACAT CTACATAGTTTGGTCCCTCCTTTGGTTCACACAAATTTTAGAACTAGAAATGTTCTTTTAGATGAAAATTATACTGCCAAGGTTTCTGATTATGGATTCT TCAAAATGCAAAGAAAAGCTGATCAACCTGGCTCATCTTCAAACATAGACTGCTTTCTTGATCCAGAGTATGCTACAATATTACATGTTCTTTGAAAAAA TGCCACCCTCCCCTAAAAAACTTGCATGAAGTTCTTTAAATACTTTCATGTTATTCTAAAAATGTGACACATGTTTAAAATGTTTTAGTTGTAATTATGT GTAGGTTTAGAAAATATTATCATATATTCTCTTATAATAGTTATCTTAAAAATCACACTTAAAAACTATATATGGTTGGTTGATGATTAGGAACGGCAAC GGCGCGTGTCAGGGTTAGGTTTGTACATATCAAAATCCAAACCCGAAATTCAACATGTTTGAAAATAAAGATACCATCATTGAACCCTTCAAGTTTTGGG TAACCCAAACCCGAAAATAAATGTAATAAGAAAAATATGATATTATTTTCGTTTCTTTTTTTTCTAACATTTATATTTTC BLAST |
Tissue | pods |
Gene name | LI_gene_156273; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442189
Blastp | Putative serine/threonine-protein kinase-like protein CCR3 from Arabidopsis with 37.4% of identity |
---|---|
Blastx | Probable leucine-rich repeat receptor-like protein kinase At5g49770 from Arabidopsis with 40.15% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G55950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447876.1) |
Pfam | Protein tyrosine kinase (PF07714.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |