Id Trinity | TRINITY_DN47877_c2_g1_i17 |
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Name Transcript | Ll_transcript_442216 |
Sequence | CCCAAGTCACTGTTGAGTATAGGAATGACAATGGAGCCATGGTCCCTCTCAGGGTGCACACAGTCCTAATCTCAACTCAACATGATGAAACTGTCACAAA TGAACAGATTGCTGCAGACTTAAAAGAGCATGTTATAGTGCCAGTCATCCCAGCTCAATACCTTGATGACAAGACCATATTCCATCTTAATCCCTCAGGT CGATTCGTGATTGGAGGACCACATGGAGATGCTGGACTTACAGGCAGGAAGATCATTATCGACACGTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCTT TCTCTGGAAAGGACCCTACCAAGGTGGATAGGAGTGGTGCGTACATTGTTAGACAAGCAGCGAAGAGTATCGTTGCTTCGGGGCTTGCTCGACGTTGTAT TGTACTAGTTTCCTATGCAATTGGAGTCCCTGAGCCATTGTCTGTGTTTGTAGACACCTACAAAACAGGAAAGATTCCAGACAAGGACATCTTGGCTCTA ATTAAGGAGAACTTTGACTTCAGGCCAGGAATGATTGCCATCCATCTTGACCTCACAAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGAC ATTTCGGACGTGATGATTCTGATTTTACTTGGGAGACAGTAAAGGCACTCAAGCCAAAGGCTTAAGTTTTCCAGCCATGGCATTTACACAGGTGGTTATC ATCGTAGCCATCTTTCAGATTTCAGGTTGAAAGGAAAATAGAGGAGCTTTGATGCATACATCTCTAGTTGAAGATATGTTTCACAGCTTAGCTGAGAAAT GAGACTAGAGATATCTCTTAGATTTCACAGCATTAGAAAACTAGGAGAATGTGGCATTAGCTACCTCTTTCGTTTTTAGCTTTACCACATTAAGTTTCTT TACTGTTTATTGATTGTTTTGCAACCAATCTGGTGTGGTTGGTGTAAACCTAGAATGTTTGTATTTGATATTTATTTATTGAATTTGTGATCAGTTTATA AAATTGTTCACCTCATAAAAAAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_156273; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442216
Blastp | S-adenosylmethionine synthase 2 from Nicotiana with 91.82% of identity |
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Blastx | S-adenosylmethionine synthase 2 from Actinidia with 93.18% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107807060) |
CantataDB | Link to cantataDB annotations (CNT0001925) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425510.1) |
Pfam | S-adenosylmethionine synthetase, central domain (PF02772.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |