| Id Trinity | TRINITY_DN47877_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_442202 |
| Sequence | GCGAGTCATTCGTATATTTTTCTATTAATAAATGTAGGGGTGTATAATATCTATATATACCCAACGCTAGCCTTCATTCTCTTCCCCACATAGTATTATT ATCTTCCTCTTAGTCCTCCTCTATCTACTAAAACTACCAAATCGAAATGGACAATACCTTTCTCTTCACCTCAGAGTCCGTCAATGAGGGCCACCCCGAC AAGCTCTGTGACCAGGTTTCAGATGCCATCCTTGATGCGTGCTTGGAGCAAGACCCAGAGAGCAAGGTCGCCTGTGAGACTTGTACAAAAACTAACATGG TTATGGTCTTTGGTGAGATCACAACCAAAGCTAAAGTGAACTATGAGAAGATTGTTAGAGACACTTGCAGGGGCATTGGGTTTGTGTCAGCTGATGTTGG CCTTGATGCAGACAAGTGCAATGTTCTTGTCAACATTGAGCAACAGAGCCCTGATATTGCCCAAGGAGTTCATGGTCACATGACCAAAGCACCTGAGGAG ATTGGAGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTTATGCCACTTACTCATGTGCTGGCTACTAAACTTGGTGCCA AGCTCACTGAAGTCAGAAAGAACAAAACCTGCCCGTGGTTGAGGCCTGATGGTAAAACCCAAGTCACTGTTGAGTACAGGAATGACAATGGCGCCATGGT CCCTCTCCGTGTGCACACAGTCCTCATCTCAACCCAACATGACGAAACTGTTACAAATGAACAGATTGCAGCAGACTTGAAAGAGCATGTGATTAAACCT GTGATCCCAACTCAATATCTTGATGACAAGACCATCTTCCACCTCAACCCCTCCGGTCGATTTGTGATCGGAGGACCCCATGGAGATGCTGGTCTAACCG GTAGGAAGATCATTATCGACACCTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCTTTCTCTGGAAAGGACCCTACCAAGGTGGATAGGAGTGGTGCATA CATTGTTAGGCAGGCAGCAAAGAGCGTTGTAGCTTCAGGGCTTGCCCGACGTTGTATCGTGCAGGTTTCTTATGCAATAGGAGTCCCAGAGCCACTGTCT GTGTTTGTAGACACCTACAAAACAGGAAAGATTCCAGACAAGGACATCTTGGCTCTAATTAAGGAGAACTTTGACTTCAGGCCAGGAATGATTGCCATCC ATCTTGACCTCACAAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGACATTTCGGACGTGATGATTCTGATTTTACTTGGGAGACAGTAAA GGCACTCAAGCCAAAGGCTTAAGTTTTCCAGCCATGGCATTTACACAGGTGGTTATCATCGTAGCCATCTTTCAGATTTCAGGTTGAAAGGAAAATAGAG GAGCTTTGATGCATACATCTCTAGTTGAAGATATGTTTCACAGCTTAGCTGAGAAATGAGACTAGAGATATCTCTTAGATTTCACAGCATTAGAAAACTA GGAGAATGTGGCATTAGCTACCTCTTTCGTTTTTAGCTTTACCACATTAAGTTTCTTTACTGTTTATTGATTGTTTTGCAACCAATCTGGTGTGGTTGGT GTAAACCTAGAATGTTTGTATTTGATATTTATTTATTGAATTTGTGATCAGTTTATAAAATTGTTCACCTCATAAAAAAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156273; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442202
| Blastp | S-adenosylmethionine synthase 2 from Nicotiana with 94.07% of identity |
|---|---|
| Blastx | S-adenosylmethionine synthase 1 from Vitis with 94.33% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107807060) |
| CantataDB | Link to cantataDB annotations (CNT0001925) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425510.1) |
| Pfam | S-adenosylmethionine synthetase, N-terminal domain (PF00438.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |