Ll_transcript_442204

• Id Trinity: TRINITY_DN47877_c2_g1_i9
• Name Transcript: Ll_transcript_442204
• Sequence: GCGAGTCATTCGTATATTTTTCTATTAATAAATGTAGGGGTGTATAATATCTATATATACCCAACGCTAGCCTTCATTCTCTTCCCCACATAGTATTATT ATCTTCCTCTTAGTCCTCCTCTATCTACTAAAACTACCAAATCGGTATGTATCTTTTCAATGTCTCATCAAATGCTGCTTTTTAGAATTTGCATTCTGAT TTAGATCTAATGTTTTAATACTTGTTTTCATGTCATGATATATATATAATTGAGTGATGTATTTATCTACTTGTTTATTCAATGCATGTTAAACTATTAG CATTGTCCATTTGGATCTTTTCTGCATTTATCATTTGATTCCTCTTCTACTGGATCTGGTTTATTGCTATTGTTTGTTGCACAATTCTCAGATCCACATG GCTCATTTTTTCTATGTTTCTGATGTTTGTGCTTTTCCTTAGAAGAAAGGGGAGGGATCAAGTTACTCCAAGAGTAACTCTTTTAGACTTACTCTTCATG TTAGCCATCAATTTTAAACTTACTCCAATGGTTTGAGATTTATTTGTGTGGGACTCAACCTGAAGTAGCTTTTGCAGCTACTATTTTCCTACACTGATTG GTAACATAAAGGGATCTGTTTTCTGCTTGGTTGGTCAATTGTCTGTTTTTGAAGACAAAAGGCTAAAGAGTAAAACATTTTCAATCCATTGAAAAAGATG GAACAAGACTATTCCATCCGGTTATGTCTGCAAACCAACACTATCATACCACAACCAAACTTTTATCTTATTAGGTTGTGTCAATATGTATCAAATGATA CCATAAAAAACTAACACTTATTTCCTTTCTTCACAATTAGATTCACCAACATCAAGATTAAACTATTGATTGCACGGATCTACATATATTTCAACAGTTT TTAACAAAAGTTCTCTGTAGCAAATCTAAAAGATAAAAACAGGCATACCAGTAAATATGAATTATTTTCTTTGATATATTAATACTGCATGCTTGCAAGA AATAGACCTAATAATGGATGGCAGCTTCAAATGCACTCTAAAGAGTAAAGTAAATCAATTAAAAACATATAGCATGTCTCACAAAAACAAAATATATACC GTAGATTAATTTTATAATGAAATCAAGATAGTTAGGTTCATGCAATACAATGTGTTGTTCATTGGCATTGCTTTAATGTAGCTTCTTCTTTTTTTGAATT TTATGTAGCTTCTTTATAAAACATAACTTGACATATCTTTTTCTCCCCCCTTTTGAATGCCAGAAATGGACAATACCTTTCTCTTCACCTCAGAGTCCGT CAATGAGGGCCACCCCGACAAGCTCTGTGACCAGGTTTCAGATGCCATCCTTGATGCGTGCTTGGAGCAAGACCCAGAGAGCAAGGTCGCCTGTGAGACT TGTACAAAAACTAACATGGTTATGGTCTTTGGTGAGATCACAACCAAAGCTAAAGTGAACTATGAGAAGATTGTTAGAGACACTTGCAGGGGCATTGGGT TTGTGTCAGCTGATGTTGGCCTTGATGCAGACAAGTGCAATGTTCTTGTCAACATTGAGCAACAGAGCCCTGATATTGCCCAAGGAGTTCATGGTCACAT GACCAAAGCACCTGAGGAGATTGGAGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTTATGCCACTTACTCATGTGCTG GCTACTAAACTTGGTGCCAAGCTCACTGAAGTCAGAAAGAACAAAACCTGCCCGTGGTTGAGGCCTGATGGTAAAACCCAAGTCACTGTTGAGTACAGGA ATGACAATGGCGCCATGGTCCCTCTCCGTGTGCACACAGTCCTCATCTCAACCCAACATGACGAAACTGTTACAAATGAACAGATTGCAGCAGACTTGAA AGAGCATGTGATTAAACCTGTGATCCCAACTCAATATCTTGATGACAAGACCATCTTCCACCTCAACCCCTCCGGTCGATTTGTGATCGGAGGACCCCAT GGAGATGCTGGTCTAACCGGTAGGAAGATCATTATCGACACCTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCTTTCTCTGGAAAGGACCCTACCAAGG TGGATAGGAGTGGTGCATACATTGTTAGGCAGGCAGCAAAGAGCGTTGTAGCTTCAGGGCTTGCCCGACGTTGTATCGTGCAGGTTTCTTATGCAATAGG AGTCCCAGAGCCACTGTCTGTGTTTGTAGACACCTACAAAACAGGAAAGATTCCAGACAAGGACATCTTGGCTCTAATTAAGGAGAACTTTGACTTCAGG CCAGGAATGATTGCCATCCATCTTGACCTCACAAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGACATTTCGGACGTGATGATTCTGATT TTACTTGGGAGACAGTAAAGGCACTCAAGCCAAAGGCTTAAGTTTTCCAGCCATGGCATTTACACAGGTGGTTATCATCGTAGCCATCTTTCAGATTTCA GGTTGAAAGGAAAATAGAGGAGCTTTGATGCATACATCTCTAGTTGAAGATATGTTTCACAGCTTAGCTGAGAAATGAGACTAGAGATATCTCTTAGATT TCACAGCATTAGAAAACTAGGAGAATGTGGCATTAGCTACCTCTTTCGTTTTTAGCTTTACCACATTAAGTTTCTTTACTGTTTATTGATTGTTTTGCAA CCAATCTGGTGTGGTTGGTGTAAACCTAGAATGTTTGTATTTGATATTTATTTATTGAATTTGTGATCAGTTTATAAAATTGTTCACCTCATAAAAAAAA AAAAA
• Tissue: pods
• Gene name: LI_gene_156273;
• Additional information: details;

Expression of Ll_transcript_442204

FPKM

• PAB: 0
• PNAB: 0.9
• PS1: 0.7
• PS2: 0.2
• PS3: 0.3
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442204

• Blastp: S-adenosylmethionine synthase 2 from Nicotiana with 94.07% of identity
• Blastx: S-adenosylmethionine synthase 1 from Vitis with 94.33% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (107807060)
• CantataDB: Link to cantataDB annotations (CNT0001925)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425510.1)
• Pfam: S-adenosylmethionine synthetase, N-terminal domain (PF00438.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;