Ll_transcript_442196

• Id Trinity: TRINITY_DN47877_c2_g3_i2
• Name Transcript: Ll_transcript_442196
• Sequence: GTAATATATACATTTAAATTTTCCTAGTTTTTCATGGTAGAGATAAATTTACTTTAGAGGAACATTTTCAGGAACTATATACTACAAAATTACTTGAGAG AAGGAGGAGCAATTCAATTACTTGCTTGTATAGTTGTATTGCTAGCGTGAAATGTGCCATTCATTCAAGCAAAGAGACTTTTGAGTCATATTCTAATGCT TCTAAGATGCATAATTTGAGAATTTTTGTATCTGGGTTGCTTCATTTGTGGGGGCCAAGAAAATGAAAGAAAAAACAAGAAAACTCATAGGGAGTTGAAT TCTGAGTACATTTCAGATATAATAGTGTAGGAAACTTAACAATGTCCAATAACTCTAATATCACCACAGATCCACATATCATTCAAATGAAAGATCAACA ACAAAGTATTTCACGACCAGACTCTATCGAGGCACAAGATTCAAGCTTTCCAAACAAAACAACAGTGGCAGGAGGAATAACAAGAAGCTTCTTCCAAATT CTCTTCTACGTCCACTTATTCCTAATTGCAGTGTTTGTTATTTTCCTTACCATCTATGGTCTTGTATCAGACAAGAAAACCCACCATTTTTACCCTCTGA AATGGTACCCTCAACTTCTAGTTTCAACAGCTTGTGCTGGAATTATTGGTTTCACATGGGTATGGATCATTACCCAAAATCCCACAAAGGCAATCATTTC AGCATTTTGGCTAAGTCCACTTCTAACATGTGCAATGGGAATTCTGTTTATATACATTGGAATTGCACTAAGTCTAGCAGCTGGTGTGGTTGCTTTGATT TCTGCATTAATTCAATCCCTCTATGGTTGTTGGGCCAGTCCAAGATTTGAATATGGCACCAAAATCTTGCAAGTTTCAATAGCTTCTCCTCCTAATAAAA TCAAGAGCATGGTATTTTCATCAATCTGCATTGGTGTACTTTTTTGCTGTTTTCTTGTGTCTGGTATTGGAGGAGCTAGAGCTATGGAAAACAAAACCAA ACTAGCTGCCCTATTCATCTTCCTGATCCTGCTGAGCCTGGGATGGACTATGCAGTTTCTGAAGAATGCAATGCTTGTCACGGTTTCGAGGGTCAAGTAT ATGCAATTTGCTGGAGGACCTGACATAGACACGAGAGTAGCGTTTCACGACACGATCAAATACTTATCTGGAAATGTTTCCATAGGCTCCCTCCTCGTCC CTGTCATCGGGCTTTTTCGCGGATTTGCTCGATCAATGAGTTCGATCGGAGGAGATACACATGAGTTTATGTTTTCATGTGTGAGTTGCTATATGAAGGT TGCATCTTTTCTTGTGACCAGTGGGAACCGTTGGGGCTTTGTGCATGTTGGAGTGTATAACAAGGGTCTTGTGCAGGCATCTTCTGATACTTGGGAGATG TTCATTAGAACAGGTATGGAGCAACTGATAGACTTAGATCTCACTGGAGCTTTTTGTTTCCTGAGTGGGGTTGCAACTGGTTCAATATGTAGTTTAGTGG GTGGAATTTGGACCATTGTAGTGCACAAGAACTATGCTATAGAAGTGTCCATTTATGCTTTCCTCATTGGCTATTTCATGTGTAGGTTAGCTATGGCATG GCCACAAGCATGTGTTTCAGCTTACTATGTTGCCTATTCAGAGAATCCACAGAGTACTCAATTTGATACTACCATTCCAGTGCGGTTAGAGCAGCTTCAA AGATCTCGCAAATAGTCTGATATATGAATTTGCAGTCTTCATTTTAGATGAATATTGATGTGTATTTCTTATTCCCTTTACAAGAATATAGACAATTAGA ACTGCTGGTCATTAGTGACAACACAATTGAGGCAAGAACACCATATATATTTGAAAAATCTATTTGTCAATATTTGAAATTGTGATTGAAGTCATTGTTA TGCAGATTGAAGCCATGGCGGCATAATTTTTTTTGTGATTTAGAAAAATGAATTTGAATTTGATGTGATCTAATATAGTCATGTTATTGTAACTCAATAT CACATTTCAACTGCAGTACGACACAATTATGAAGGTCA
• Tissue: pods
• Gene name: LI_gene_156275;
• Additional information: details;

Expression of Ll_transcript_442196

FPKM

• PAB: 1.9
• PNAB: 1.5
• PS1: 3.9
• PS2: 3.2
• PS3: 5.2
• PW1: 0.4
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442196

• Blastp: Protein pns1 from Aspergillus with 24.89% of identity
• Blastx: Protein pns1 from Aspergillus with 26.94% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AFUA_3G12970)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430809.1)
• Pfam: Plasma-membrane choline transporter (PF04515.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;