Id Trinity | TRINITY_DN47878_c0_g1_i3 |
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Name Transcript | Ll_transcript_443499 |
Sequence | AAAAAATGAAGAAATCCCTCTTATCTACATAAAAAAAGTGACAAGTGTTACTTATAAACTAGTTATTAATAACTAAAGTATCAATGTGATACATGCAACA CTTTTGTGGATAACAACTGTCATTTCTAGAAATGGAATTATTGATTTTGATCTTATAACACAGAACACGTGCAAAACCATCCTACATTAGTTTTCGATCT GAAGATCAATGAATGATTACACAATCTTATCACAAAATGGAACAACTACACCACTTTCACTCTGTATCTGTAATCCTACTATTCTTATTCACTTCTTTCT CTTCAATCTCATCTTACCAACATGAACAAGATCCTTCAATCACAACAACCATGGAACAATTTTCTGGCTACGCAATCCATGAGCCACCTCACTCTTCCAA ACCCATTTCCCTCTCTTCACTTTCCCTTGATGCCCATGCACTTCACAGACAGTTTGATGAGTTGGCAGCATTTTCTGACTCACCTACTCCATCAGTAACC AGGGTCTTGTATACTGACAAGGATGTCTTAGCTCGCAGGTATGTGAAAATTTTGATGGGGATTGCCGGTCTATCCGTGAGAGAGGATGCTATTGGTAACA TATTTGGTCGTTGGGACGGCCTTGAAACCGAACTTGCTGCAGTCGCAACAGGTTCTCACATTGATGCTATACCTTACTCAGGAAAATACGATGGAGTTGT TGGTGTTTTAGGCGCTATTGAAGCCATCAATGTCCTGAAAAGGTCTGGTTTTAAACCTAGAAGACCGTTGGAAGTCATATTATTCACATCAGAAGAACCA ACACGCTTTGGAATAGGTTGTTTGGGAAGCCGCTTATTGTCTGGGAGTGAGAATCTTGCAGAAGCTCTAAAGACCGCAACTGATAGCCAAAATATATCCT TCTTAGAAGCTGCAAGATCTGCTGGGTATGCAAAAGATGAAGATGATTTATCTAGTGTATTTTTAAAGAAAGGAACATATTCTGCTTTTGTGGAACTACA CATAGAACAAGGCCCTATTCTGGAAGATGAAGGTCTATCTATAGGCATAGTTACTGCAATTGCAGCTCCTGCTAGTCTAAAGGTTGAATTTGAAGGCAAT GGTGGCCATGCGGGTGCAGTCCTTATGCCTAACAGGTGCCTTGCACCTTTATCATGTTCTATTGTTGCCATAACTTGACAGCAACACAACTTAAAAATAT TCTTCCCGAAGTTTATTAGGCCTTCTTTAACTTTTTTCAACATCAATTGACACTTTCTTCAACTAAAATACTGTTCTCCGATCTTTGTTAATTCTTAGTT TTGGTCTATTCAATATCCTCCTCCAATAATCTTGAGTGGAAGAATAATAGAGCCAAGTAGAATATTATGAGTTATCTGGTTATATTTTCTACTTTCTAGT GCACTACTTTGATCCCTTTTGAAATTGAAGTTTCTTACTTGATGTTACTCTAACTCTTCAACTGTAATTTATAAATTATTTGGAGTAGAAATGATGCTGG ACTTGCTGCCGCTGAACTGGTCTTGGCTGTTGAGAAACACGTGCTGGAATCCGGGTCTATTGACACTGTTGGCACTGTGGGTATACTGGAACTGCATCCT GGAGCAATCAACAGCATCCCTAGCAAATCACACATAGAAATTGACACGAGAGACATTGACGAAGAACGAAGAAACCATGTGATTGAGAAAATCCACCAAT CAGCAATTGGAATAACGAAAACCAGAGGTGTCAAGCTTTCTGAGTTTAGTATCATCAATCAGGATCCACCAGCCCTTTCCTCTGAAGCAGTCGTCATGGC TGTGGAGACTGCAACAAGAGAGCTAAACTTGACGAGCAAGTTGATGATTAGTAGAGCCTATCACGATTCGTTGTTTATGGCCAGGTATTCCAGAGACAAG GGTCAGGGTATTATTAAATAAGATATTATTTCCTTATGAAATGCTCCAAAACCCATAATTTTTCAAACATTAAAAAATGAAGAGACTATAATAAGTTCAT AGCAAGAGAAAATGTTCATTTAGAGGTTCCTTATTCACATTCATGGGTGATAATGAGTGGATGAAATACATTTTGGCTTCTTTATGTAAGGGCCAAACCT CAGCAAAAAGGAAAAAGAAATTGGCGAGTAAGGGGTGAAAAGTAAAAATCTGGGGAGGGGGAGACTTAATCTTTAACATGCTCGCGATGGGTTGAATATC TTCTTGCTCCCACCAAATATGGCATTTTCTTCACTTTTTTCATCCATGTAGCCGATCTCATATACTGAGATTTAAAGCTTGATTGTTGTATTAAGATTCT TGTTGTGTTAGTAGACTTGATTAGTCTTATACTAGTAGTAATACACTAGTACTTGACCTAATAATTAGTATAAAAGCTATTGACCTTTTTTATAAGAACA ACAAATTTCATAGACATTTATATCTTACATTCAGACTATTATCGAGAACCTATTTTCGATGTTTTCGATCTAAACCCTACAATTTCAACAGTTTTGAACA TACTGACAGTAACTAAATAGACCCAGATTTGCACAATTTTAGTCTAATTATATTATGTTACAATTAAACCCTAGATTGTTACCGAATAATGGTACGGTTA TGGACACATGGTTCATTTGTGTAGGCGCACAGATGATAAACCATGCAGTGCTTTGCTCTTATGTTCCATTATGTAACTGCAGGTTGTCTCCAACTGGCAT GATTTTCATTCCATGTTACAAAAGTATTGACTTTTATGCCTTTTGTGCTATATGCATTAATCTGATACTATTTTTAAAATTGTTTGTGTAATCAACAACC ATAATGAAGGAGGAAAAAAACTCAGTTAGTACTCTTTATGTAATTAATTTAAAGCATCTAGTCACATGTGAATGAAGATCCAATGCATGAACTTAGAAAT AAGAAATGTTGCATAATTTTTTCCTGTTAAATGCTGATACATTCACATGCATGTGGACATGCTTTCCAGTTTCCAATGAGCATTGATGAACAAAAAAATG TATTGTTTTCTTCTTTTTTCTAACACCTTTATAAAGGGATTGTTGATTTATGAATATTGTTATTGTTCATGTTTTTTTGCAGGATACAGCCATAAGCCTG AAGAATTTGCCAGCATTGAAGATGTTGCTAATGGTGTAAAAGTATTGGCCCTTACCCTTGCCAAATTGTCCCTTCAGTAACATCTTCTGTTGTGATTTTA GTGTGGACTATCATTGTGGAACAAATGGATGTAAACTGTAAATTACCACTGCTACAGCTTAGTGATTGAATAATGTTAAATTGGATATATATAAATACCC CCTTTTGTCTATTAGAAAGAGAGGTTGTTTATCCATCTAATTGAAAACTTGATCTACAAATTGTTGAT BLAST |
Tissue | pods |
Gene name | LI_gene_156281; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_443499
Blastp | Ureidoglycolate hydrolase from Arabidopsis with 78.55% of identity |
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Blastx | Ureidoglycolate hydrolase from Arabidopsis with 78.55% of identity |
Eggnog | succinyl-diaminopimelate desuccinylase activity(COG0624) |
Kegg | Link to kegg annotations (AT5G43600) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459091.1) |
Pfam | Peptidase family M28 (PF04389.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |