Ll_transcript_442802

• Id Trinity: TRINITY_DN47879_c1_g1_i1
• Name Transcript: Ll_transcript_442802
• Sequence: CCTAAACACATGCATTTGAAAAAAAGTTGAAAATGGAAGAGAGGAAAAAATAACAGTACAACATGTCCCCATAAAATTATATACAGACCACAGCAAGAAC ATAAAGGACACTCTTTTCTCCTTTTTGCTTCACTTTTTTCTTCACATTCCTTCCATTTTTTTCTTTGCTGATTCCCCGTGTCAAAAATCAACACCCTTTT CACTCTTTTCCGTGTCTTACTTTTCTTTTTCTATAAAAACCATTTCCCCATTACTAGGGTTTGAAATGTGGAGGGAGAATGGAACCCTCTGAATCCGATT CTGCTCTTGTTTCCATTGGTTCTTCTGTCACTGACCCTCAATTGGGTTCTCAATCAGCACCGTCTTCTATTCATTCCCATCATGATCGCGGTCCTGAACC CTCAGATCTCAGTCATGTGACCCAGGATGAAGAAGAAGAAGCACTTGGTGCAGAGCTTGAGACCAAGTTGGATTTGAAGGGTGAGGGTGAAGTGGGTGGT GAAACTGTGGATAAAGTTTCGAACTTTGATGATGGGGAACAAGTATGTGATGAGGGTAGTGGTGGTGGTGTTATTGAAGTTGAAGAATCTGTTAAGGTTA ATGTGAATGATGGGTTTGGTGGAAATATTAGGGGTTGGGATTGTAATAGTTGGGATGAGGATGTGAATGATGGTGTGAATGTGAATGAGGGTTTTAATGA GTATGAGGTTGGTGGAGATGATTATGCTGTGAATGATGGTGATTGGGCACAGGTAGAAGACAAAATCAGGGGTAGAACTCAACATTACCCTTTAAGGCCT GGTGCTGAGGATTGTGCATATTTTATGAAGACTGGGAATTGTAAATTTGGTTTCAATTGCAAGTTTAACCATCCGATCCGAACGAGAAACCAGTCTTTAA AGGATAAGGCAGCAGAACGAGAAGACTCAACAGAAAGATTGAGCCAGACAGAGTGCAAGTATTATCTAAGGTCTGGAGGTTGCAAGTTTGGAAAGGCTTG TAAATATAACCACACAAGAGGAAAATATTCAGCCGCCCCAGTTTCAGAACTTAACTTTCTCGGCCTACCTATTCGTCTTGTATGTAACCTTATTGTCTCT TTCTACAGTTCTAAAATAGTTGTCTATGAAATTTAACAAGGTTGTTTTTATGACAGGGAGAGAGAGAGTGCCCCTATTACATGCGAACTGGCTCTTGTAA GTATGGAGCAACCTGCAAGTTTAATCATCCTGATCCTACAACTATCGGGGGACCAGATTCTCCTTCTGGGTATGGTAATGAAGGGTCTATTTCATTACAA GGTGTATCAAAACCATCTGTATCCTCTTGGTCTCCTCCAAGAACATTAAATGAAACACCTTTTGTGCCAATGCTTTCACCTTCTCAAGGGGTTTCTCCCC GAAGTTCTGATTGGAATGGATATCAGGCACCTATGTACCTATCTGATTGGAGTATGCATCCACCTTCTGCATATGTCATGAGCAATCCAGCAATTGAAAC AAATGTTTATATGCAACGTCAAAACCAGATGCCGGTTGATGACTTCCCAGAGAGGCCTGGTGAACCTGAATGCAGCTACTTCTTAAAAACTGGGGATTGC AAGTTTAAATCTAATTGCAAATTTCACCATCCAAAGAATCGGACTGCAAGATTACCTCCATGCATCCTCAGTGACAAGGGTCTGCCTTTGAGGCCTGACC AAAATATCTGTTCACATTACAGTCGCTATGGAATTTGCAAATTTGGACCAGCTTGCAGGTTTGACCACCCGATAGACTTGCCTTCCCCGGTGATTCCAGC ATTTGATGAGCAGTCTTTTACAAACTCACCTAATGTTGAGGTGGCTGGGATTGGTGGAAGTGCAGATGCAAGTGATGTGACAATTCAGCAATATGTATAA AGATCTTTGTCAAGTATCTTCTAGCTTTTTGAGGACTCATCACCCAGAATTTTAGCTTTCTTCTTAAACTTGATAAATCTATTTAACTTTCTCTGGCTCT GCCTTATGCAACAGAAGCTTTGCAGATAATAGCAATATATATGTCAAACAGAAGTTTTATGTATTTATTACAAGTAACAACAGCACCTGTAGGCTAATGT GTGTGAATGTGAATTTTCTTGATTTACTAGTGCCAATGGAGTTATGAACCTTGGCTATGGCTAAAAGGATGACTGTTACAGGTAAGCAGAGGCCCCCATA AAACAAAGCACTAACGAGCCACGGGTTGGCTTATATAGTCTCTTGATTCTCCTCATGGTGGTTATTTTGATTCTCTGACATGATTTTTGATGTTTCTTTT CCCCATACCCCACTAAGTAGGAGCTTTGTGCAATGGGTTGTCCTTTTTCTTATATTGTCTATTGTAGTTGTGCCTCTTAGCCTCCTATAGATAAAAGACC ATTGAGCTACAACGCGAATAAAAGAGACTCCAATAAGATCATGGAACGGAAGTTCACCACGAGTCCACGACGACCCTCTGGCAGGTTGTTCAATCTAATG ATTGTGCAAAGTTAGCTAGAAAATCTAAGTTGCCTGCCTTCCTTCATAGCGTGACTGTGTGGAGCTCCTAAGGTTGAGATTTTAACTCAGCAATGACAAT GATAAAGTGTATGGTTGGGTGTGAGATCACCCTTTCATCAGAAGGCCAACCACAACTGTAGAAACACTCTTAAGCCAAGGTGAGAGATGTAGGAATCCCC CATTCTTAGTCATTAACACACTTTAGAAGCTAGAATTCTGAACAAACCTTGCACCTTCACAAGTTGCTCGTCTTCCTCCCTCTCTAGAACCCATCATACT TCACTTTCACTCACTGGCCACTGGTCTGGCAAAAAACATGTGACAAGCTGAACTTGCCCGGAGGACCCATCGTCATTGCCCGATTGCACCCGGTCTAAAT CATGGAGTAACACATGAATTGAGATGATAGATTTGATCACTTTTCATGTTAGCACACTATAGCCAAAAATAAGTTTATCTGATAATGTGTGTGGTTATGT AGTGCTTGCTACATTTTATTGGAACGGTACATGTGTTACATACACTTTAATAGAGTGGTACAATTCCTTTGAAGTACACAAGGACATGTACAAAGAGGAA TCTAGATCCTCACCAACACGGGATAAAAATTGTATAGATCCTCTCCAGCACCGGATAAAAATTGTAACATCTTTGGGGGAAAATGTTTGCAGTTATGG
• Tissue: pods
• Gene name: LI_gene_156286;
• Additional information: details;

Expression of Ll_transcript_442802

FPKM

• PAB: 0.5
• PNAB: 0.2
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0.6
• PW2: 0.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442802

• Blastp: Zinc finger CCCH domain-containing protein 43 from Arabidopsis with 47.14% of identity
• Blastx: Zinc finger CCCH domain-containing protein 43 from Arabidopsis with 60.62% of identity
• Eggnog: zinc finger(COG5063)
• Kegg: Link to kegg annotations (AT3G48440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457498.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;