Ll_transcript_442258

• Id Trinity: TRINITY_DN47884_c3_g1_i1
• Name Transcript: Ll_transcript_442258
• Sequence: AATAAGAAGAAAAAAATCCAAAAAAGAATGGTATAAGATCGCCACTGTCACATCACATTTGTGATTGGTCGCTCTCTTTTTTTTGGTCTTTCTTCTCGCT GTGTCCTTCACTTCCTTCTTCTCCTTCTTCATAGAATGACAGTTTGTTCATCACCTTCATCATCGTTTGAATCTTCCAATAACGGAAAAACATGGATCAT CCATGGAATTGTAGCAGGAGTAGCAGTTACAGCAGCTGTGGTTGCACACGCTTATCTTAACCGATTCAACAAATTCCGGACCCGGGTCGTAGGCATCATA CCCGCCCGATTCGCTTCTTCTCGCTTCCCGGGAAAGCCTCTCGTTCAAATCCTTGGCAAGCCCATGATCCAGAGGACATGGGAAAGGGCAACGTTGGCAG CTACATTGGATCATGTTGGTAGGTTTATCTACAAGATCTTCCTACAATCTGGCATGAATATCTTTGATATATTACAGTCCTAGATTATTCTCTGAAATCG TTATGAAACACACGCCTCTAGTCTAAGTGAAACTAAGATTAACATATAATTTGTTGCCCTTAGCCACAGAATACCTAAGTGAAACTAAGATTCACATATG TAGATTTTTGCTTTGAGGGTGAACTGAAGTTTTTATTTCTCTTTCATATGCATGCCCAATATGTTTTGCTGCTACAAGGCATTGAACAGAGACATAACTT ATGCTGTTGCACAAATACATCCTTAAACTGTATGGGTAAATTATTTGCATTGTATTTCTGCATTGCAGCTTACACTGACATACTGTTTTTTCACCAATTC ATGCATGCCAAACCTCTTTCCGGGCTTTTAAAGGAAATAAATTATCAATGTTTCCAAGAGACCAAGATCGAACAGCTTTGCATTGCATTCCTTTCTGACT GTATTGGAACTAATTTAAAGAGAGATTTGGTTGGGGTTGTGGTATACCGTATACACAGATTTAAGTGCATTTCATACTGTATGTCATCAGTGCATGTGCA TCATATACAAGAACAAGATAACCACTTATACAATTTGGTAGTCTTTACATGCATCTGTGCACATCTGGCTTGCTTCTTTGAAGTCAATTTGGTAACTGTC TCTTGCTATAGTTGTGGCAACTGATGATGAAAAGATTGCTGACTGTTGTCGACAATTTGGAGCTGATGTGATAATGACATCAGAATCTTGCCAAAATGGT ACTGAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAAAAATATGATGTTGTTGTCAACATTCAGGGTGACGAGCCTCTCATCGAACCTGAAATAATAG ATGGTGTTGTCAAAGCTTTGCAGGCAGATCCAGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAACCCTGAAGATGCTCATGATCCAAATAGAGTGAA ATGTGTGGTAGACAATCGTGGTTATGCCATCTATTTTTCACGGGGATTAATCCCATTCAACAAGTCAGGGAAGATTAATCAACAGTTCCCATATTTGCTT CATCTTGGGATTCAGAGCTATGATGCAAAGTTTCTAAAGATATACCCGTATCTTCAGCCTACTCCGTTACAACTTGAGGAGGATTTGGAGCAGCTTAAGG TCCTTGAAAATGGCTATAAGATGAAGGTAGTCAAAGTTGACCATGAGGCCCATGGTGTTGACACTCCTGAAGATGTTCAAAAGATAGAATCTCTTATGCT TGAGAGGAACTTGGCTTGAACTCTACTTCAATGAAATCAAGTGTAAGCTAAGCATTAGTAACAATGCATCATAGATAAAGATGGTGTGTAACCCTCTATT TATTTTTTGCTTGTTGCTTTCAACAACTTAGCACAAGTGTCTTGATTTATGATGAAATATTTTAGTATAGGTAATAGGAAATCCCTCCCATTTAGTGAGA ATGCAAACTTTTGGTTTAAGACTTTGAGATAGTGGGACTCCTCTCCATTAACTGGTGTGTAAAAGTAAAGAAAAAATAGCACATAAAAACATTTATATCC TTTTTATTTAAAATGATATTACATTTTTACCCTTAAAATACAAAGAAAA
• Tissue: pods
• Gene name: LI_gene_156323;
• Additional information: details;

Expression of Ll_transcript_442258

FPKM

• PAB: 1.8
• PNAB: 0.8
• PS1: 2.8
• PS2: 1.4
• PS3: 4.1
• PW1: 2.1
• PW2: 2.3
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442258

• Blastp: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 86.19% of identity
• Blastx: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 86.21% of identity
• Eggnog: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (By similarity)(COG1212)
• Kegg: Link to kegg annotations (AT1G53000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413598.1)
• Pfam: Cytidylyltransferase (PF02348.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;