Ll_transcript_442262

• Id Trinity: TRINITY_DN47884_c3_g1_i4
• Name Transcript: Ll_transcript_442262
• Sequence: AAAATTTATGAAGAAAAAAACAACCTGGAAAAAGAAAAGAAAACAGATAACATGCGACCACAGTTTCTCAAGTAACGAGGCAGATCCAAAATTGTGTTCA GGTTGTTACTGTCACATCCTTAACGACACATAGTCCTTCCTTTCATTTGGATCCTACAACTTCTTTTCCTTCTTCTTCTCACCATGTCAATTTCTCCCTC ACCTTCATCTTCTTCATCATCATTGTCTTCTTCATCTTCATCTTCATCTTCTTCGTTGGAATCTTCGAATAACGGGAAGACATGGATCATCAATGGCATT GTTGCAGGAGTTGCAATTGCAGCAGCTGTGGGTGCACGCACTTACCTCAACCGATTCAACAAATTCAGGAGCCGGGTTGTGGGCATCATACCTGCCCGTT TTGCTTCCTCTCGCTTCCAAGGAAAGCCTCTCGTTCAAATTCTTGGCAAGCCCATGATCCAGAGGACATGGGAAAGGGCAAAATTGGCAGCTACATTGGA TCATGTTGTTGTGGCAACTGATGATGAAAGGATTGCTGACTGCTGTCGAAAATTTGGAGCTGATGTGATAATGACATCAGAATCTTGCCGAAATGGTACC GAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAAAAATATGATGTTGTTGTCAACATTCAGGGGGATGAGCCTCTTATTGAACCTGAAATAGTCGATG GTGTTGTCAAAGCTTTGCAGGCAGCTCCAGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAAGCCTGAAGATGCTCATGACCCAAATAGAGTGAAATG TGTGGTCGACAATCGTGGTTATGCCATCTATTTTTCACGAGGATTAATCCCATTCAACAAATCAGGGAAGGTTAATCAACAGTTCCCTTATTTGCTTCAT CTTGGGATTCAGAGCTATGATGCAAAGTTTCTAAAGATATATCCGCATCTTCAGCCTACTCCATTACAACTTGAGGAAGATTTGGAGCAGCTTAAAGTCC TTGAAAATGGATATAAGATGAAGGTAATAAAAGTTGACCACGAGGCCCATGGCGTCGACACTCCTGAAGATGTTCAAAAGATAGAATCTCTTATGCGTGA GAGGAACTTGTCTTGAACTCTAGGGCAATGAAACAAGTGTAAGCTAACCATTAGTTCAATACATGACAGATAAAGATGGTCTGTAACTGTATTCATTTTT ATAACTTTTTTGCTTGTTGCTTTCAACAACATAGCGGGGTGTTATGATTTATAATGAAATATTTTAGCATGGGTAGTAGGACTTGTTTTTCCTCCCCATT ATTACTAGTGTTTGTATATGATAAAGAAGTGAGAATGCAAATTTAGTTAAAGTATATGAATTGTATCTTATCCTAGAAAAGGTTGAAGTAGGATGTGGAT AATTTGTAATGACCTGCAGAGAAGTGTGCGATTGAACTATATCATGAATTAGTTGGTTTTATAATGAAGAAATTGTTGCTAG
• Tissue: pods
• Gene name: LI_gene_156323;
• Additional information: details;

Expression of Ll_transcript_442262

FPKM

• PAB: 0.7
• PNAB: 5.9
• PS1: 7.2
• PS2: 6.9
• PS3: 8.2
• PW1: 7.6
• PW2: 8.5
• PW3: 6.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_442262

• Blastp: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 87.46% of identity
• Blastx: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 87.46% of identity
• Eggnog: Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (By similarity)(COG1212)
• Kegg: Link to kegg annotations (AT1G53000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449157.1)
• Pfam: Cytidylyltransferase (PF02348.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;