Id Trinity | TRINITY_DN47884_c3_g1_i5 |
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Name Transcript | Ll_transcript_442264 |
Sequence | AATAAGAAGAAAAAAATCCAAAAAAGAATGGTATAAGATCGCCACTGTCACATCACATTTGTGATTGGTCGCTCTCTTTTTTTTGGTCTTTCTTCTCGCT GTGTCCTTCACTTCCTTCTTCTCCTTCTTCATAGAATGACAGTTTGTTCATCACCTTCATCATCGTTTGAATCTTCCAATAACGGAAAAACATGGATCAT CCATGGAATTGTAGCAGGAGTAGCAGTTACAGCAGCTGTGGTTGCACACGCTTATCTTAACCGATTCAACAAATTCCGGACCCGGGTCGTAGGCATCATA CCCGCCCGATTCGCTTCTTCTCGCTTCCCGGGAAAGCCTCTCGTTCAAATCCTTGGCAAGCCCATGATCCAGGTCAACCCTTCCCCCTTTCCTTTCTTTT TTTGTCTCATGCTGTGAAATGAATAAAAGTATAAATTTTAATAACGTATTGTCCTATTTTAATGGGATTAAACACCAAATAATAATCCCTGCTATGCGAT TCAATTATGATAGAACATTATGACGACCAAGTTGGTTGGCACAGTTGATCCTGCCTACTTCGAAAAGACTTGATTGTTGTTGTTGTCGTGGTGTTTGTAT GTACTATATATAATAAACATAACACCTGCCTAAGCTTTGATGCAAATAAAGTTTGAACTCTACATGTTATGCTCGCTGATAGCTATTGTTGCAATTTTAA AATGTGTTTTTTCATGTTTAGAAAGGATTACAGTGTGATGGGTAATGAGTGAAACTTAGGAGTTACAACATTGTTGAGCAAATTTGGACCTTCTGCTACA GGATGTATAGTTTGTTTTCTCTTAATTCCATAACTTTGATTTTATTAGTTTTGATAATAACTATCATCCTATGTTGGGAATAGTAGGAGGTAGTTTTGGC TACAGAAAAGTTCGTTTTAAAAATATTAAATGGATGAAGGTGGAAGGGGATACATGCATAATGTACAAACTGTACTAACTTGATGCAATCCCCTTTGAAG GTGCATTTTGGTAGGTGTCCTTCAGAGAACAAACAAGAGAAAGATTGATTTGGATTAATACGAAGGGCCTGCCAATTGCAAGGCATTCTGAAGAACTTCA GCATGCACTGTTAAACTCTTCTCTGGCTACTAATGAAAATAAAGGACATGGGAAAGGGCAACGTTGGCAGCTACATTGGATCATGTTGGTAGGTTTATCT ACAAGATCTTCCTACAATCTGGCATGAATATCTTTGATATATTACAGTCCTAGATTATTCTCTGAAATCGTTATGAAACACACGCCTCTAGTCTAAGTGA AACTAAGATTAACATATAATTTGTTGCCCTTAGCCACAGAATACCTAAGTGAAACTAAGATTCACATATGTAGATTTTTGCTTTGAGGGTGAACTGAAGT TTTTATTTCTCTTTCATATGCATGCCCAATATGTTTTGCTGCTACAAGGCATTGAACAGAGACATAACTTATGCTGTTGCACAAATACATCCTTAAACTG TATGGGTAAATTATTTGCATTGTATTTCTGCATTGCAGCTTACACTGACATACTGTTTTTTCACCAATTCATGCATGCCAAACCTCTTTCCGGGCTTTTA AAGGAAATAAATTATCAATGTTTCCAAGAGACCAAGATCGAACAGCTTTGCATTGCATTCCTTTCTGACTGTATTGGAACTAATTTAAAGAGAGATTTGG TTGGGGTTGTGGTATACCGTATACACAGATTTAAGTGCATTTCATACTGTATGTCATCAGTGCATGTGCATCATATACAAGAACAAGATAACCACTTATA CAATTTGGTAGTCTTTACATGCATCTGTGCACATCTGGCTTGCTTCTTTGAAGTCAATTTGGTAACTGTCTCTTGCTATAGTTGTGGCAACTGATGATGA AAAGATTGCTGACTGTTGTCGACAATTTGGAGCTGATGTGATAATGACATCAGAATCTTGCCAAAATGGTATGCAAGTTAATTGCATGTTATAACCATTT TTTTTTGTATATTATTATTTTGCAATGTTGCAGTCTTTGTTATGCTTAATAGGTACTGAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAAAAATATG ATGTTGTTGTCAACATTCAGGGTGACGAGCCTCTCATCGAACCTGAAATAATAGATGGTGTTGTCAAAGCTTTGCAGGCAGATCCAGATGCAGTGTTCAG CACTGCAGTCACATCTTTAAACCCTGAAGATGCTCATGATCCAAATAGAGTGAAATGTGTGGTAGACAATCGTGGTTATGCCATCTATTTTTCACGGGGA TTAATCCCATTCAACAAGTCAGGGAAGATTAATCAACAGTTCCCATATTTGCTTCATCTTGGGATTCAGAGCTATGATGCAAAGTTTCTAAAGATATACC CGTATCTTCAGCCTACTCCGTTACAACTTGAGGAGGATTTGGAGCAGCTTAAGGTCCTTGAAAATGGCTATAAGATGAAGGTAGTCAAAGTTGACCATGA GGCCCATGGTGTTGACACTCCTGAAGATGTTCAAAAGATAGAATCTCTTATGCTTGAGAGGAACTTGGCTTGAACTCTACTTCAATGAAATCAAGTGTAA GCTAAGCATTAGTAACAATGCATCATAGATAAAGATGGTGTGTAACCCTCTATTTATTTTTTGCTTGTTGCTTTCAACAACTTAGCACAAGTGTCTTGAT TTATGATGAAATATTTTAGTATAGGTAATAGGAAATCCCTCCCATTTAGTGAGAATGCAAACTTTTGGTTTAAGACTTTGAGATAGTGGGACTCCTCTCC ATTAACTGGTGTGTAAAAGTAAAGAAAAAATAGCACATAAAAACATTTATATCCTTTTTATTTAAAATGATATTACATTTTTACCCTTAAAATACAAAGA AAA BLAST |
Tissue | pods |
Gene name | LI_gene_156323; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_442264
Blastp | 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 82.97% of identity |
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Blastx | 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial from Arabidopsis with 75.76% of identity |
Eggnog | Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (By similarity)(COG1212) |
Kegg | Link to kegg annotations (AT1G53000) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413598.1) |
Pfam | Cytidylyltransferase (PF02348.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |