Ll_transcript_443713

• Id Trinity: TRINITY_DN47889_c3_g2_i5
• Name Transcript: Ll_transcript_443713
• Sequence: AAGTGACTCTCGATCTTACTCTTCAAAATTCAACTTCTCTTCTTTTTCTCTCTCTCTCTCTCAGGTTTTGTATCGTGCCATGAGTAGGTCATCGACACGA AGTAAAAACAAAAGGCAGAGACAGGGGGATGATGGTGCCTGCAATTCTGAAATATGGAGGAAAATTCATCAAACTGGTGCGGTGACCAAAGATGATATGA ATAAATTGTATATGATTTGGAAGCCGGTCTGTTCAGGCTGTCGTGTGAATACCAAAGACAACCCAAATTGCTTCTGTGCATTGGTTCCACCTCCAAATGG AACCCGGAAGTCTGGCCTATGGATCAAGATGTCAGATTTTATTAAAAGTCTTGGTCCTGACCCAACCAAGGATCTCCGTGCTTCTGCTAGTTCACCTGCA GGCCTGACAAATCTTGGTGCAACATGCTATGCCAACAGTATACTCCAGTGTTTGTACATGAATAAATCTTTCCGAGAAGGCATATTTTCTGTAGAACAAG ATGTTTTACAACAACAACCTGTGTTAGATCAACTGGCTCGGCTTTTTGTACAGTTGCACATCAGTAAAATGTCTTTCATAGATTCTTCGCCATTTGTAAA AACACTGGAGTTAGACAATGGGGTTCAGCAAGACAGTCACGAGTTCCTGACGTTGCTTCTGTCATTGCTTGAGAGTTGCCTGAGCCATTCGAAAATTGCA AAGGCTAGAACGATAGTACAAGATCTTTTCCGGGGAAGTGTGTCCCACTTGACAACTGTCGCGTTTTGTTGTTGTCTAACACAAAGTGTCTGACATGTTT CCATCAAGGTCCCTTTCTTGAAGTGTCTGTGCTTCATATATCAAAAGTGACTCTGGTGTTCACGATGTGGAAAAGACTCTGAAGCTTCTTCCAAAAGAGA AGACTTCTGTGAGTTGGAGTTGAATGTCAAGGGGTTGAAAAGTTTAGATGAGAGCCTGAATGATTACCTAAGTGTTGAAGAGCTTCATGGAGACAATCAA TATTTTTGTGAGTCATGTAAAACAAGAGTTGATGCTACCCGCAGCATCAAACTGTGTACATTACCTGCTGTGCTTAATTTTCATCTTAAGCGTTATGTCT TCCTTCCAAAGACTACAACAAAGAAGAAAATTAGTTCTGCGTTTTCATTTCCAGCTGAACTTGATATGCGTCATAGATTGTCTGAGCCGTCTCAGTTTGA ATTGCTATATGATTTGTCAGCTGTACTGATTCACAAGGGAAGTGCTGCTAATAGTGGTCATTACATTGCTCATATCAAGGATGAAAACACTGGGCAATGG TGGGAATTTGATGACGAGCATGTCACTAACTTGGGTCGTCATCCATTTGGGGAAGGAGCTTCTACATCTAAATCTGTTAAGGCTGATGTAGCTCATTCTA ATTGCTCAGAAGCCAGGATAGCTGACAGTAATGGAAATGGTTTATATGCCTCTCATTCACAATCTTCGCACTTGGAGACATTTTCATCAAGTGATGCATA CATGTTGATGTACCATCTTAAACATACCAAAAATGTTGGTGAAACAGGGAGCACGATTTGCAGTGCAAACCATAAAGAAAGAGATGTTGATGCAGTTACT GTACAAGCCAATGCTCATCTTCCTTTTCATCTTCGTGAAGAGATTGAAAATTTCAATGTAAAGTATCTTGATGCTTGTAAGCAGTACAGTGATAAGAAAG AGATAGAATTGAATTGTATCAATGAGAGGAGACAGGAAGTTCGATCTGTTCTAGCTGAAGCTCCTGTTAAACCACTGGAGCAATCATTTTTTTGGATTTA TAGTGACTGGCTTCGCCACTGGGCTGACAACATAGTTCCAACTGCTCTTGACAACACATCTATCCAATGTTCACATGGGAAAGTCCCAGTATCAAAGGTT ACCTCAATGAAGCGATTATCTTCTAAAGCATGGGATAAGTTATTCTCCAAGTATGGTGGGGGCCCAAAATTGTCCAATGATGACCACTGTTGGGATTGTC TGATTGATGGGGCCCAGAATGTTGTGTCAGGTGACACCTATCGGGGTCAAAGAGAATCACTGAAGCAACTTGCACGGAATATTCTTGATGGAAACTGTCA AGATGGGAAGTACTATGTATCCAGACCATGGTTGCTGCAATGGTGGAAAAGAAAAGTTCTCGATGCTCCATCTGAAGCCGATGCTGGACCAACAACATCC ATTAGTTGTCCACATGGGCAACTTATGCCTGAGCAAGCTGCTGGTGCTAAGCGGGTCCTTGTTCCTGAGGGTTTCTGGTCCTTCTTATATGAAGATGCGA TTTCTGTACAACTCGATGATCCTTTGGATTGCCCTACTTTTCCTTTAGACTCCAGAGAATGTTCCCAATGCTGTAATGAGTTATCTGAAGTAACTTGTTT GGAGGACTCTTTGAGATTGGTGAAACAAAGGCATCGTCAGAATCATGAGAAACTATTCCTGGGAAAAAGTATGCAACTCTCTCTGCATTGCAATTATTTC TTAGTTCCTTCTTCGTGGATTTCAAAATGGAGAAATTACATTAGTCCAACTGTCAAGAATTCAGATAAACCTGAAACTTTAGATGCAGTAATTGATTCGT TGATGTGTGAAAAGCACTCACAACTCGTTGAAAGGCCTCCTGAACTGGTTTTCAGACGCAACACTATATCCACAAGAGAGTCTGCTGCAGGTGGCTTAAC CATCATCTTTGAGAATGATTGGAAATTACTCTGTCAAGAATGGGGTGGTACTGAGACCAAAGGAATATCTGCAACAATTGTTGATATTAATGAATCGGAG AATGCTTTGGCTGGATCCTGCAAAGAGATGCCAATATGTGAGGATCATTTGGATAATGGAAGTGGGAATGGACAAGTTGTGATTAAGACTTGCCCAGAGG TTTGTGAAAGTTGTGTTGGGGAAAGAGAAAGCTGCAAGCTAATGCAGAAACTAAATTATTGCAACCAGGAGATATCCATAATTCTTGTTCGTGGAAAGGA GGTCCCGAAATCCATCTTGGAGGCTTCAAAGGGCTTTGTTGAAACGGATCGTCGGGTTTCCAAACGTGCTCGGAAGATTAAGAATGGGAGTTCAACCAGT CTTAAAGTTTCTGCTTCAACAACAATTTACCAGCTGAAAATGATGATATGGGAATCCGTCGGGGTTGTCAAGGAAAATCAGGTACTGCAAAAAGGTGATA GAACAATTGATATTGATAATGAAAATGCTACACTTGTGGATGTAAACATATTTGCTGGAGATCAGATTATAGTGAGGGATTCTGAGATTCATGAAAATAG AGATATTGCTGATGAGTTTTTTGATGAAAAAATGGATACACAGCATACAGAGGAGGGTTTTAGAGGAACACTTTTGACATCAAATATTTCATCTCAAGTT GTTTAGGAAGCCCTTTCCGAGGATTGATATCTTTGTAAATATATGACACCCAGTGCACGAGTCTCTCATCTAGTGGATTTTGGAAAGGTAAATATATGCA GCCTTATCCCATAAGCGGAGAGGCTCTCCGGGTGTCGGAACTTGCCAAGCGTTGAATGCTAATGGTCCTTTGATGCCAATATACTGGCAAATTTTGGAAT GTATTTTAATTTTTGTATGAGCAAAACTTAAAAGAGAGAGGATGGTACCTTATTTTAAAATGGTGATGTTATTTTTAAGGCTGGGTTATCAATAGCACGC TATAGCAGTGCGATAGCGGTGTTGCGGAGGTCGCCGGTCCCTTCCCGCGACAGAAAAGTGGATAGCGGTGCGGCCTACCGTCGCGGTTGTTGCAGCTGCC GTTGCGTTCTGCTATACCTCCATTTCGCAGACTAGGAGGTCGCCGGTACCTTCATTTTTTTAAATGAAAAATGTCTTTTTTATCCTTATTTTTTTCTGTT AGTCTTTTCTGATTTAAAAAAAACCCTTTCACTTCTCTCTCATTTATTT
• Tissue: pods
• Gene name: LI_gene_156376;
• Additional information: details;

Expression of Ll_transcript_443713

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.2
• PS3: 0.4
• PW1: 0.2
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443713

• Blastp: Ubiquitin carboxyl-terminal hydrolase 26 from Arabidopsis with 53.63% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 26 from Arabidopsis with 58.18% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(COG5077)
• Kegg: Link to kegg annotations (AT3G49600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457791.1)
• Pfam: Ubiquitin carboxyl-terminal hydrolase (PF00443.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;