Ll_transcript_443715

• Id Trinity: TRINITY_DN47889_c3_g2_i6
• Name Transcript: Ll_transcript_443715
• Sequence: CTATATCACTCACTTTTCTTCTTCTGATAAATGGATTCCTTTATCTATTTTCTCTGACAGACTACAACAAAGAAGAAAATTAGTTCTGCGTTTTCATTTC CAGCTGAACTTGATATGCGTCATAGATTGTCTGAGCCGTCTCAGTTTGAATTGCTATATGATTTGTCAGCTGTACTGATTCACAAGGGAAGTGCTGCTAA TAGTGGTCATTACATTGCTCATATCAAGGATGAAAACACTGGGCAATGGTGGGAATTTGATGACGAGCATGTCACTAACTTGGGTCGTCATCCATTTGGG GAAGGAGCTTCTACATCTAAATCTGTTAAGGCTGATGTAGCTCATTCTAATTGCTCAGAAGCCAGGATAGCTGACAGTAATGGAAATGGTTTATATGCCT CTCATTCACAATCTTCGCACTTGGAGACATTTTCATCAAGTGATGCATACATGTTGATGTACCATCTTAAACATACCAAAAATGTTGGTGAAACAGGGAG CACGATTTGCAGTGCAAACCATAAAGAAAGAGATGTTGATGCAGTTACTGTACAAGCCAATGCTCATCTTCCTTTTCATCTTCGTGAAGAGATTGAAAAT TTCAATGTAAAGTATCTTGATGCTTGTAAGCAGTACAGTGATAAGAAAGAGATAGAATTGAATTGTATCAATGAGAGGAGACAGGAAGTTCGATCTGTTC TAGCTGAAGCTCCTGTTAAACCACTGGAGCAATCATTTTTTTGGATTTATAGTGACTGGCTTCGCCACTGGGCTGACAACATAGTTCCAACTGCTCTTGA CAACACATCTATCCAATGTTCACATGGGAAAGTCCCAGTATCAAAGGTTACCTCAATGAAGCGATTATCTTCTAAAGCATGGGATAAGTTATTCTCCAAG TATGGTGGGGGCCCAAAATTGTCCAATGATGACCACTGTTGGGATTGTCTGATTGATGGGGCCCAGAATGTTGTGTCAGGTGACACCTATCGGGGTCAAA GAGAATCACTGAAGCAACTTGCACGGAATATTCTTGATGGAAACTGTCAAGATGGGAAGTACTATGTATCCAGACCATGGTTGCTGCAATGGTGGAAAAG AAAAGTTCTCGATGCTCCATCTGAAGCCGATGCTGGACCAACAACATCCATTAGTTGTCCACATGGGCAACTTATGCCTGAGCAAGCTGCTGGTGCTAAG CGGGTCCTTGTTCCTGAGGGTTTCTGGTCCTTCTTATATGAAGATGCGATTTCTGTACAACTCGATGATCCTTTGGATTGCCCTACTTTTCCTTTAGACT CCAGAGAATGTTCCCAATGCTGTAATGAGTTATCTGAAGTAACTTGTTTGGAGGACTCTTTGAGATTGGTGAAACAAAGGCATCGTCAGAATCATGAGAA ACTATTCCTGGGAAAAAGTATGCAACTCTCTCTGCATTGCAATTATTTCTTAGTTCCTTCTTCGTGGATTTCAAAATGGAGAAATTACATTAGTCCAACT GTCAAGAATTCAGATAAACCTGAAACTTTAGATGCAGTAATTGATTCGTTGATGTGTGAAAAGCACTCACAACTCGTTGAAAGGCCTCCTGAACTGGTTT TCAGACGCAACACTATATCCACAAGAGAGTCTGCTGCAGGTGGCTTAACCATCATCTTTGAGAATGATTGGAAATTACTCTGTCAAGAATGGGGTGGTAC TGAGACCAAAGGAATATCTGCAACAATTGTTGATATTAATGAATCGGAGAATGCTTTGGCTGGATCCTGCAAAGAGATGCCAATATGTGAGGATCATTTG GATAATGGAAGTGGGAATGGACAAGTTGTGATTAAGACTTGCCCAGAGGTTTGTGAAAGTTGTGTTGGGGAAAGAGAAAGCTGCAAGCTAATGCAGAAAC TAAATTATTGCAACCAGGAGATATCCATAATTCTTGTTCGTGGAAAGGAGGTCCCGAAATCCATCTTGGAGGCTTCAAAGGGCTTTGTTGAAACGGATCG TCGGGTTTCCAAACGTGCTCGGAAGATTAAGAATGGGAGTTCAACCAGTCTTAAAGTTTCTGCTTCAACAACAATTTACCAGCTGAAAATGATGATATGG GAATCCGTCGGGGTTGTCAAGGAAAATCAGGTACTGCAAAAAGGTGATAGAACAATTGATATTGATAATGAAAATGCTACACTTGTGGATGTAAACATAT TTGCTGGAGATCAGATTATAGTGAGGGATTCTGAGATTCATGAAAATAGAGATATTGCTGATGAGTTTTTTGATGAAAAAATGGATACACAGCATACAGA GGAGGGTTTTAGAGGAACACTTTTGACATCAAATATTTCATCTCAAGTTGTTTAGGAAGCCCTTTCCGAGGATTGATATCTTTGTAAATATATGACACCC AGTGCACGAGTCTCTCATCTAGTGGATTTTGGAAAGGTAAATATATGCAGCCTTATCCCATAAGCGGAGAGGCTCTCCGGGTGTCGGAACTTGCCAAGCG TTGAATGCTAATGGTCCTTTGATGCCAATATACTGGCAAATTTTGGAATGTATTTTAATTTTTGTATGAGCAAAACTTAAAAGAGAGAGGATGGTACCTT ATTTTAAAATGGTGATGTTATTTTTAAGGCTGGGTTATCAATAGCACGCTATAGCAGTGCGATAGCGGTGTTGCGGAGGTCGCCGGTCCCTTCCCGCGAC AGAAAAGTGGATAGCGGTGCGGCCTACCGTCGCGGTTGTTGCAGCTGCCGTTGCGTTCTGCTATACCTCCATTTCGCAGACTAGGAGGTCGCCGGTACCT TCATTTTTTTAAATGAAAAATGTCTTTTTTATCCTTATTTTTTTCTGTTAGTCTTTTCTGATTTAAAAAAAACCCTTTCACTTCTCTCTCATTTATTT
• Tissue: pods
• Gene name: LI_gene_156376;
• Additional information: details;

Expression of Ll_transcript_443715

FPKM

• PAB: 0.8
• PNAB: 1
• PS1: 0.5
• PS2: 1.8
• PS3: 1.7
• PW1: 1.1
• PW2: 0.5
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443715

• Blastp: Ubiquitin carboxyl-terminal hydrolase 26 from Arabidopsis with 53.63% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase 26 from Arabidopsis with 54.04% of identity
• Eggnog: ubiquitin carboxyl-terminal hydrolase(COG5077)
• Kegg: Link to kegg annotations (AT3G49600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457791.1)
• Pfam: Ubiquitin carboxyl-terminal hydrolase (PF00443.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;