| Id Trinity | TRINITY_DN47891_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_443171 |
| Sequence | TCACTTAATTTTCGAGAGTCAAATAATGCAGGAAATCGCCTTATAGCTGCACTTTCTCTGCCTAGATATCACTATGTAAAGCAGATTAACCTTGAATTTG CACCAGATGTTGATGACACACATCTCATCCTTATTAAGGACAAGTGTTTTGATTCTCTTCAAAGATTGGAGTCTTTAAATCTGAATGGCTGCCGAAAAAT CTCGGATACAGGAATTGAAGCAATAACCAGTTGTTGCCCTCAGCTGAAAACATTTTCTATCTACTGGAATGTGAGGGTTACAGATACAGGACTAATACAT ACAGTGAGGAACTGCAAACACATAGTTGATTTGAACATAAGTGGCTGTAAGCACCGACCTGGTGCCTAGAGAAAAGCATACACTACAATGCGCATGGTCG AGACGAGAAGTATGCGAAGAGGTTATGAAGATCGGAACCAGGAGAGGGAGGAATTGTGACGAGAGAGAGAGAAGAATTGCAGGCTCGTTTGGAATTGAAT GAAGCACGAACAAAGCAGACTAAGGATTTGCTAGCAGCAATTGCAGCAAAATTAGGGGTTCGCCAAGGCGTGAATCAGAGTGACGAAGGCAGTGAAGTTG ATGAGAATTCCAATTCTCATGGGAATCGAGGAAGAGAGTGCTGACAAAAATTGGAAATTCAAATTTTTGCCGGAGATGATGCATTCAGATGGACACAAAT TGGAGCGCTATTTCTTCCTGAAAGGAGTTTCAGATGAAGAGAGGATGCAAGCTACCATGATGTCGTTGGAAGGAAGAGCCTTAAGTTAGTACCAATGGTG GGTACAATGCAATCCAAATCCAACATGGAGGATTTTAAGTTGGCAATCGGTTTCAACCTTCAATGGTTCAGAACCCATTTCAATTATTGCTAGCTCCTAG GCAAACAGACACAGTAGAGGAGTTTGAGAAATTTGTGGGAGCGTCGAAAGAAATTGATTAAGAATTTGTAAAAGGAATTTTCGTGAATGGGTTGAAAGAA GAAATTCAAGTGGAGGTGCGATTGTAAGAGCTTCAAACTTTCTCGGAGAATATTTCAGACCAAGGTTTACAATTTGTTGCTGAGAGTTATCCAGCACTAG AGTCAGTGAACTTGACAAGGTGCGTAAAGGTAACAGATAATGGTTTGAAGCAGTTATTGCACAAATGTCTATCTCTTCAGAGTTTGAATCTCTATGCCCT GTCCAGTTTCACAGATGAAAGCTACACGAAAATAAACCTTCTGGCGCATCTCAGGTTTTTGGATCTCTGTGGTGCCCAGAACCTTTCAGATGAAGGACTC TTCAGCATTTCTAAATGCAAATACCTTGTATCCCTCAATCTGACATGGTGTGTACGTGTGACTGATGAGGGGGTCATATCCATTGCCGAGGGCTGCACCT CTCTTGAATTTCTAAGCTTGTTTGGAATAACTGGTGTGACTGATAAATGTCTGGAGGCACTCTCAAAGTCATGGTCAACCAAAATTACGACCCTTGATGT GAACGGATGTATCGGCATCAAGAGAAGAAGCAGAGAAGAACTTCTTCAATTGTTTCCACATTTGGAATGCTTCAAAGTTCATAGTTAAATTGTGTCTTTC TGCATGTTCTGTATTTTTTTACTATTCTTATATAACTTGTAAAACTAATGTGTATTTTGGTCAAGGAAAAACATTTTATCCTAGTGATTTAGTTGACTGA AGATTATGTAGTTTCAGTAATTGTGAGTTGAATTGGTCTCTTTGAGGACCAGCAATAAAACTGATCAAGTTTTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_156398; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_443171
| Blastp | F-box protein At3g58530 from Arabidopsis with 67.52% of identity |
|---|---|
| Blastx | F-box protein At3g58530 from Arabidopsis with 71.67% of identity |
| Eggnog | F-box protein(ENOG410Z034) |
| Kegg | Link to kegg annotations (AT3G58530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426638.1) |
| Pfam | Leucine rich repeats (6 copies) (PF13306.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |