Ll_transcript_443175

• Id Trinity: TRINITY_DN47891_c2_g2_i5
• Name Transcript: Ll_transcript_443175
• Sequence: GTGGACTTCAAAACCTTAAACCTTTAAGCGTATTTGTAGATCGAAAAGAAGGAGCGACAATTCTGATAACAATGGAGGTAATAACTACAAGAGAGGCAAA AGACGTGATTTGGTGTAGAGAAACAGTTCCAAAGGTTTTGAAACTGGTTTGTTCAACGTTACCTTTCACTCACAAAGACCTTGTCTCTCTCCTCTTCGTC AGTCCATGGCTTCATCGTACCCTTGCTTCCTGCCAACCCCTTTGGCATTCACTTAATTTTCGAGAGTCAAATAATGCAGGAAATCGCCTTATAGCTGCAC TTTCTCTGCCTAGATATCACTATGTAAAGCAGATTAACCTTGAATTTGCACCAGATGTTGATGACACACATCTCATCCTTATTAAGGACAAGTGTTTTGA TTCTCTTCAAAGATTGGAGTCTTTAAATCTGAATGGCTGCCGAAAAATCTCGGATACAGGAATTGAAGCAATAACCAGTTGTTGCCCTCAGCTGAAAACA TTTTCTATCTACTGGAATGTGAGGGTTACAGATACAGGACTAATACATACAGTGAGGAACTGCAAACACATAGTTGATTTGAACATAAGTGGCTGTAAGG TACATGATGGCTTGGATTTGTTTTTGTATTGAATGCTGATTTTTAAAGGTTTGTTATGTGTAGAATAACTGAAAGTGAAAACATTATATACAATATGTGT ATATTTAGTTGATGCATCCCTTCATTCTAAGTCTATGGCGCTGTTTGAAATCATAATTCATTACTGAAAATGAAAAATTCTAGCACTTAAATTGATTTCT GGGTTTTCAGTTAATGGCTACCAAAAACAAATTTAAGTGAAAAGCACTGAAAGCATTCAGCATATGCGAGGCCAATAAATTGATTCAGGAGGAGCTCTTT ACTTGTGTAAATTAATGTCAATTGTTTCTAGGTGTAGACTTATTTATAAAATGAAATGTTCAATTTCCTTTGATACATGATCAGCATTTATTATGAAAAT ATGTTCAAACATTGCAAACCAGAACTTAGTTTCTTTGCCATTAAAATCTTCAGCCGTGTTTAGTTTTATCATTCCAAACCACAAGGAGTTGGACTAGTGG TTAAGGAGGTGAGCTCCCTGCCTTGACTATTCGGGTTCAAACCTTGGCCCAGCACGTAGAGGATTTGATTTATCTAATTACACTTGGCCCAGCACCTTCT GTCCTGTATAAACTCTCAACTCTTTCTTCCGTGGGTCATTAGGTAGGTCAGGGGTGTTGGTTCTTTGGTATTTAAGGTATAAGTGTTTGCTGGTTCATAG ATATGTTTTTTGCTGAGTGGAGGTAAAACAACAGAGGTTTCAGGTATGGCTTGTGTTATTGTAGTGGTTTCAGGTCTGAGTTATGGTCGGGTTTGTATAA TTTCTGAGATTTGGACTGCTATGTGTAATTCCAGGGGTTTCAGATCTGATTTTGAACATCCATTCCCTGTTTGTGTATATTTTCTGCTTGTTATTACATG AAGAAACCAGTATTTAAGGATGTTGGCCACACTGAGTATTGGCCACTCAAATCCCTTTCAGTATCAGAAAAGTAAAACAGAACCACTTCCCAAGGAAAGA AATAAAACAAAACAGGAAACACGATATTTGGGTTATGAAATCTGATCAAACCCAATAAAAAACATGTCAACACACGATAGATCAACATTGAACCTTATAA AATCTAATCATGTGGAGATTTCCCATGTGACTAACTACAACTATTCTATTGATTCATCTGATGTCACTCCATCAATCACCGTTGCAAGTATATTGCTTCT ATAGTAAACTTCCTTGACATGGAAGTGAATTGATTCTCAATAATACATATTTCTTGTATTAATCTCTGCTCAATTACCCTCTTCCGTGGTTTTATAGAAT GGCTAATAAGCTTCACCCCATGTAATTTGCACAATTCTATGTACCCTGCTTGTTGATAGGAACAATTCTAGAAGTAGGCTTCCTATTAAAAAGGTATATG CAATGCGAAAAGATAGAAAATATTAGAAGAGATAACTAGGGATTAGATAAATAGATAATTCCCTAATTATTACAATCAAAAGGAATAACGTAGATTAAGA TAAATAAACTATTCCCTTATTGTTAGGAAGGGGAGTTTTCATCAATATAAATAAGAGGGTAAGCACCTCAGCTTGGGTGGGATTCTAGTAGTTAGGAATT GGCTGGACAGGTTCATTGGGAACCTGGTTGTAACTACTGTAATTGCTATAATTATTTCAATTAATAATGTTCTTCTATTCTTTATCACATTGATCCTGAA TAATACTTCCTTTTCTTATTTGTGTGTTAATTCTCATTCTCCATTGGTTCTAATTCTATCACTGGGATCAAAGCACCGACCTGGTGCCTAGAGAAAAGCA TACACTACAATGCGCATGGTCGAGACGAGAAGTATGCGAAGAGGTTATGAAGATCGGAACCAGGAGAGGGAGGAATTGTGACGAGAGAGAGAGAAGAATT GCAGGCTCGTTTGGAATTGAATGAAGCACGAACAAAGCAGACTAAGGATTTGCTAGCAGCAATTGCAGCAAAATTAGGGGTTCGCCAAGGCGTGAATCAG AGTGACGAAGGCAGTGAAGTTGATGAGAATTCCAATTCTCATGGGAATCGAGGAAGAGAGTGCTGACAAAAATTGGAAATTCAAATTTTTGCCGGAGATG ATGCATTCAGATGGACACAAATTGGAGCGCTATTTCTTCCTGAAAGGAGTTTCAGATGAAGAGAGGATGCAAGCTACCATGATGTCGTTGGAAGGAAGAG CCTTAAGTTAGTACCAATGGTGGGTACAATGCAATCCAAATCCAACATGGAGGATTTTAAGTTGGCAATCGGTTTCAACCTTCAATGGTTCAGAACCCAT TTCAATTATTGCTAGCTCCTAGGCAAACAGACACAGTAGAGGAGTTTGAGAAATTTGTGGGAGCGTCGAAAGAAATTGATTAAGAATTTGTAAAAGGAAT TTTCGTGAATGGGTTGAAAGAAGAAATTCAAGTGGAGGTGCGATTGTAAGAGCTTCAAACTTTCTCGGAGAATATTTCAGACCAAGGTTTACAATTTGTT GCTGAGAGTTATCCAGCACTAGAGTCAGTGAACTTGACAAGGTGCGTAAAGGTAACAGATAATGGTTTGAAGCAGTTATTGCACAAATGTCTATCTCTTC AGAGTTTGAATCTCTATGCCCTGTCCAGTTTCACAGATGAAAGCTACACGAAAATAAACCTTCTGGCGCATCTCAGGTTTTTGGATCTCTGTGGTGCCCA GAACCTTTCAGATGAAGGACTCTTCAGCATTTCTAAATGCAAATACCTTGTATCCCTCAATCTGACATGGTGTGTACGTGTGACTGATGAGGGGGTCATA TCCATTGCCGAGGGCTGCACCTCTCTTGAATTTCTAAGCTTGTTTGGAATAACTGGTGTGACTGATAAATGTCTGGAGGCACTCTCAAAGTCATGGTCAA CCAAAATTACGACCCTTGATGTGAACGGATGTATCGGCATCAAGAGAAGAAGCAGAGAAGAACTTCTTCAATTGTTTCCACATTTGGAATGCTTCAAAGT TCATAGTTAAATTGTGTCTTTCTGCATGTTCTGTATTTTTTTACTATTCTTATATAACTTGTAAAACTAATGTGTATTTTGGTCAAGGAAAAACATTTTA TCCTAGTGATTTAGTTGACTGAAGATTATGTAGTTTCAGTAATTGTGAGTTGAATTGGTCTCTTTGAGGACCAGCAATAAAACTGATCAAGTTTTTC
• Tissue: pods
• Gene name: LI_gene_156398;
• Additional information: details;

Expression of Ll_transcript_443175

FPKM

• PAB: 0.1
• PNAB: 1.2
• PS1: 0.2
• PS2: 0.2
• PS3: 0.3
• PW1: 0
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443175

• Blastp: F-box protein At3g58530 from Arabidopsis with 63.92% of identity
• Blastx: F-box protein At3g58530 from Arabidopsis with 71.67% of identity
• Eggnog: F-box protein(ENOG410Z034)
• Kegg: Link to kegg annotations (AT3G58530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426637.1)
• Pfam: Leucine Rich repeat (PF13516.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;