| Id Trinity | TRINITY_DN47900_c6_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_424230 |
| Sequence | GATATTCTCATTTGCCTTGTTTAGTAGTTGGGAAGTGCAATTTAAAACCTGGGTTGAAACCATTGATATTCTCATTTGCCTTGTTTAGTAGTTGGGAAGT GCAATTTAAAACCTGGGTTGAAACCATTGATATTCTCATTTGCCTTGTTTATGTGTCCTAGAGTTATTTTTGTTTAGGGTGAGTGCCTAAGTTCAAAGCC TGAAAAGTGGACTCCGATCCTCTCCAATAAAATACAAAATAAAGGATGTGTGTATGTAGGAATGGGCTATTTAGTATGCTTGCAGTTCCTACCAACACAG AGTTCGTATATTGATTCGGCAAAGCTAGACTCATGGGTATTGTATGAGGATAGTGGCCTTTGGACGATAGACTAATTAATCCCTTTCAGGGCACTGGGAT TGCCTGCCCCTCCTCAGTGATCTTACAAGGCAAAGGGCCAACATTCAATCCACGAGAGCAACAATTGTTAAAGGGGCAGTTACAATATCAAAAAAGGATG AGTCTCATCTAAAGGATGAGAGGTTACCCTGACAAGGACAAAAAATAGAACGCATGATACTTTATGATTTTTGGAAATAGAAATTCCAATACCCCTTTTG AAGATGGTTTGGTTTACATTGAAGCTGATCCATCTGGGTCTGACTCTTGGAAATTGGAACCAGTTATCAACCTATTGAAAGAAGGGGCTGTTGGAGTCAT CCCTACAGATACCTTATATGCAATAGCATGTGACCTGAGAAACCACTCGGCCATTGAACGTCTTCGTAGGTAGGTAGCTTTAGCTTATCTAAAGAACATT TACTCCATAAATAACTGCATTTTTTATCCCAATTTAACGAAAGGTGTAGTGTTGTATTGCAGAATCAAGAATATAGAAGTTTCAAAGCCTCTTAGCATCT TATGCCACTCATTTCGGGACATAGACAAGTATACAGCTGGATTCCCACGTGGTGATGGTCAAGGCCATGCAAATTTATTCAAAGTTGTTAAGCAATGTAT ACCTGGCCCTTACACTTTTATCTTAATGGCAAGCAAAGAATTACCTAAGCAGTGCATAAGGTTTGGCACTAATGCTGCCAAATATGCGTCAAGAAAAAAT GTTGGTGTTCGTATGCCTGAAGATGCCATTTGTCAAGCAATATTGAAGGAGATGGATGCACCATTAATATGTACAAGCATCAAGTTTCTGAAGGAAGATG AGTGGATGATTGATCCAGTTATGATTGCCGACACCTACGGACCAGAGGGCCTTGATTTTGTTGTTGCTGGTGGAGTAAGAGTGGCCGAACCGTCCACAGT GGTTGACATGACAAAAATGCCGCCCAGAGTTCTCCGGCAAGGAAAGGGTCCTATTTTACCTTGGATGGTGTGGGAAGAAGACCAGAAAACTGATATTGAA GAAGATCTAATTCCTGCTGCAATCTGAAAGTTGATAATCCATTTTGATGGAAGATTTGGCATCCTGAAATCTGAAGGTTCTTACTATTTTTATATATTTT TTGGGCTTAGAGCATACAAGGAAATGGATAGACATTAAGCACAAACTTCTCTTACATGACAAGGTGGATATTTTGTGTAAATAAAAATTCATATGTTCAA TAATGGGTTCAAATCCTGGAAATAACCTCTTCGCTTGCGAGGATACGGCTACGTACATATACCCTTCCCAAATCCCTTTAGGTGAGAGCCTCGTGTAGAG TACGTATTTTTCCAGCCTCATATTTAAGTAGTTACTGAAAATAGAAATAGTTAGATAAAAGGAATTCCATCAAGAAGATAGTATAATATCCTTTCTTCTT AAAGTGTTGGGTGCTTAAAATTTTAAAGGGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156471; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_424230
| Blastp | Uncharacterized protein HI_1198 from Haemophilus with 30.7% of identity |
|---|---|
| Blastx | Uncharacterized protein YciO from Shigella with 24.39% of identity |
| Eggnog | sua5 ycio yrdc ywlc family protein(COG0009) |
| Kegg | Link to kegg annotations (HI1198) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457191.1) |
| Pfam | Telomere recombination (PF01300.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |