| Id Trinity | TRINITY_DN47905_c5_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_422541 |
| Sequence | GGTACGAGCCTAATAGGGCTGTACAATGTATCAATTCAATCCAATTGTGACTTGTGAAGCAAAGCAAGAACAGAAAGATTTAGATTCATTATAGAACTAG CTATATTTGAAAGTGGATTTCTCAGCCACACAAAAAAAGAGGTTGAAAATGGGAATTTTGTTTCTTTTCTAATTGATCGTTCTCGTTGCCACTGCGTGCA GGCAACAGGAACATAGTAGAAATTTGCGTGCAAGTGAACAACAGCCACGTTGCTTAACCATCATTTCCCCACGCCTTTCTCAAACCACAAAAATATCTAA GTAGAAAATACATTTGATTCGGATAATCTCATTCCTAAGGACCGTAACCGCATCACATGAACGGTACTCAGAAGCCCACGTGGAAAAATCCACAATTGTT ATTACTGATAGTTCTCCTCCACCGAAATATATTATAGGTGTTGAATCGGGAAGAATAGATATATACAGTATTACATTTGTAAATGGAAGGTCAATTTACA TTATTTAAATTTATCGACCTCTAAGTCACAAGATAAATCTCGAAAAATATCCATTGTTATTTATCAGTGAGCTTTAATATCTCCATTCTCCTTTTCCAAC CAAAGAATTGAACCAGGATTTAAAACAGAAACACAATTCTGCAGCTTAAATTGAACAACTAAATGCTGAGATTAAATGTCTACTGTTCTCTGATTCCAAG TGCAAATCAAGCTAGACCACTCAGCAGCTATGATTCATTGATCATCCATAAACGAAGAGCTTCAAGATTTTCTCATGGAATTTCCATCAAGGCCAAGGCC ATAAAAGATGAAATGGATGGGGAAACAAGTGGGTCTTCAGGACGTAGCTGGGATCCTGGGTTGGAAATCGAGGTCCCTTTTGAGCAGAGACCGGTGAATG AGTACTCATCTCTGAAGGATGGAATATTGTATTCATGGGGTGAACTGGGTCCAGGGTCCTTCTTCCTTCGCCTTGGAGGCCTCTGGTTGTCAGTGTTCAT AGTTCTTGGAGTGCCAATTGCAGCTGCAAGCTTTAATCCTTCTAGGGTAAGAAAGAAGTAAAAAAATATATGGGGGAATAGAGGGTGAGTTTGATGCAAT AGTAAGGTTGTTGTTTATTGACCATGGGTCATAGATTTAAATCTTGAAAACAACCTCTCCGGTGACGGGGATAAAGGTTGCATACATCTACTCTCCCCAA ACCCTACTAGGTCGGAGCTTCGTGCACTAGGCCGTCCTTTATGGGAATCTGGGACATTTAATCAGTTAATCGACCAGAAATTTTGATGCATGCACACTAA TTTGTATCCACTAGCTGCACACAAACACGAACTAGAACATTCATAAAGTGACATATCAAAGTTCCTTGTTCCTGAGTTAATGTTACATACCTTGCAGGAG CCTCTAAGATTTGCACTAGCTGCTGGAACAGGAACTCTCTTCATTGTCTCTTTGATTGTTTTGAGGATTTATCTGGTGCGTTGTAATCCTCTCTGTGTTC TACTAGTACATACTAATCATTTCTTTTATGGGGACCAGGAAGTATTGTGTAAGACACAAAATTCAAAACACATTTGTCCCAATAGAGGACATCATGAATT CAAAAGTTCAGAACCGTATAATTGCATTTGCAGGCCAAGATTTGCAAATTTAACTCAGTTGGAACTCCCTTTTGTTGCCATGCATGTTGTTATAATGTTA TATGTTGTTACCAATGTGCAATATAATGAAAATTTCAACATAATGTAATATGTTCATGGCTCACTATTCACACCAGATATGCCTGATGATTAAAGTGGGC TGTGTCTGCACCTTTACACTTAAATACCGAAATTGTGGTCAGACGCGGTTGCGGCAATCACCACAACAGCAATGTTGCGGCCGCATCACGTGATGTGGTC CTCAAGTTGAATCACTTATCTGCACCTTTACACTTAAATACTTGGTGCAGCTAAGATAACTGAATTGCAATGCAGGGTTGGAGTTATGTTGGTGATAGAC TTCTATCAGCGGTCATTCCTTATGAAGAAAGTGGCTGGTATGACGGACAGATGTGGGTCAAGCCACCTGAGGTTAGCCTCTCACCTCTTTCCTTTGCCAA GAGATAACAGAAAAGTACCTCTTAAGAAGTAACACTTTCATAAAACTATATATATTCAAGGTGGCAAATTCAATGAGCCGAAGGAAAGATTATGTTGCAA ACCAACAAAATCATACCCCTATTAGAGGCTGGATATTAGAAAGTATACACTATTGAATATAAAATCAACCTTTTTAGATGTTGCTTGCAATTTGGCACTT GGTACCAAGACAAAATCAACTACTGGCCTTTTTAGCAAAAGACGGAACAATAGAAAACATTAAATTTAATTTAGAGATAAAGGTGAACAAATAATAGGTT AGCCACTGTTGAATTTCAAATTGTAGAAGATACTGGTTCATTGAGCAATAAGCAATCTGTTCAAAATTATTGCATACATAGGATATGGAATAAGGGCGGA CTAGTGTATAAGACTCCCATCTAGTGGGATTCGGAAAGGGTAGATGTACGTAGGTTATGGAATAAATATAGCTAAAATGTCCTAACAATAACTACTAAAG GAAATAGTGACATGCTTTGTTTATCTCATTTCAGGCACTATAAACTGAAAACTTGGCTTTCTTTGCAGATCCTAGCTCGTGATAGATTGTTGGGCTCTTA CAAGGTACTGGAGATTTGAAATAACACAACATTGCATCAACTCATCATGCTGGATTTTTTTAATGCAGGCTAGAAGAGCAATATGATAAACTTGATTTCT ATGTCTCCAGGTCAAGCCAGTTGTTAAACTTCTGAAGCAAACTCTTGTCGGTACAGGAGCATTACTTGTTACTGGAGTTATGCTATTTATTTTTGCTACA CCTGTGGAGAACTTTTTTCGAACCACCTTTACCACAGTAGAAAATAAATCTACCACTCAAACTCCAAAAGTTAACACAAAGTTCAACCTAAGGAAGGAGG AGTTGCTTCAATTGCCTGCAGACGTGATATCTAATGACGATCTAGCGGCTGCTGCTGCTGAGGCTGCCGACGGAAGACCAGTCTATTGCAGGGATAGGTT TCATCGAGTATTAGCAGGAGGCCAGTACTGCAAATGGGAAGATCTGCTCGAGTAAAGGGCGAAAGAGACATGTGTAATGAATTTCATTTTGTTAAAGCAG ATCATGATTTGTAGTAAGTGACTCTGGCCAAAAAAATTATCCTATTAGTTAAAAGACCATTTAAGGGTTTCATAGCAAAAGGATACAGCCTGCAATAGAT AGTGAAGATAAAATAAGGTTGCAGTAAGCAATAACTTTATCATATGGTACGAGACATCATATACTAGTAGCATATATATTCAGAGGGAAAGACAACATGG GTACCTAATTGAAGACTTTAAGATAAAAATGAGAACAAGAAAACAGGCTTAAATAGATATATAGACATGTGAAACTGCTGCATGCATATGTGGTCTATGC AGGCCTGAATAGATTGTATTTGATATACCATGACACAAGTTATGGTAACCAAGTAAGTAGATTGCACAAATTTGTTCAGCTCTGATTGCACAAGTTATGG GTTGATCAAAAGTTGAATTTGTTGTAACCAAATAAACAAAACTAACAAAGGAGATGCTATTGTGTTGATAAAATAAATCTTCTTCTCCAACAAAACCTAA TGATAACAGAGCACACAGCATCAGAGCATATGCATCAATGGAAATGAACGTGATGCAGAAAAGGATTTGTTGTGCTAACTCAAACATCAATAAGATTACA GGGACATGATCTAATGCATCTACACTAAAACTGAAACGTCCTCACCCACTTGATACTAATGCATATCTTCTCTAGAATATTTTATCATAAATAAACATTA CATAATTGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156510; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_422541
| Blastp | - |
|---|---|
| Blastx | Uncharacterized protein ycf36 from Pyropia with 71.43% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421174.1) |
| Pfam | Protein of unknown function (DUF1230) (PF06799.10) |
| Rfam | - |
| GO | - |