Ll_transcript_423895

• Id Trinity: TRINITY_DN47912_c8_g1_i4
• Name Transcript: Ll_transcript_423895
• Sequence: ATTTGTGTTCTATGTTCTCTTCATTGGGCAATAATTAAAGGCCATAAATTTTGAGTACTTAGGACCATAGAATCTCTATCCCTTCCTCAAAAAAACATGT TTTTATTTTCTTTGTTATGATCAAAAGTACTAACATTCTTTCACTTTAGGCCACTTTTCTTTGTTGCTTCTACTTCAAGCCATGATTATTCAACCATTTC AAACCAAACCATCTTTTCATGGCTACTCTTCTTCTTTCCATTCCTTAATCATTCCTAAAACTTTACAATCATTGCCTCCTTACCCTTCAACAAGGTCTCT CAACTTGAACTGCACCTCAAATGCCAAGGACCAAGTACGTTTATTTATTCATCACTTTTGCAGCTTAGAATTCTCTTCGGCACGGGATTATCTATTGGAT GCTCCAGTTTCTGTAGGAGATGGATTCTCTTTCAGTGGAGGAAAATATTCAGATGAACCTAGTCCAAGTGATGAATGGTTCAAACAAGGGAAAATGGTTA GAGCCTATTCAACTCCTGGCACTGGTGAAAAGGCAAAAGATCCAATTTTTGGACTCACTATGGGTGCTGGTTCTCAAGCTACCGGTGATCGATTCAGATG GTTTTGTGTTGAAAGAGGAAGTGCTGGTGGTAATCCTTCAGTGATATTAGTCCATGGTTTCCCTTCACAGGCATATTCGTATCGCAAAGTTCTTCCGGTA CTCTCGACGGACTATCACGCCATAGCTTTTGACTGGTTAGGATTTGGATTTTCTGATAAGCCTCAGCCAAAATATGGGTTTGATTACACACTAGATGAAT ATGTTTCATCATTGGAGTCACTGATCAATGAACTGGCTGTTAGTAAAGTCACACTTGTTGTCCAGGGATACTTTTCGCCGGTTGTAGTTAAGTATGCCAG CTTGCACCAGGAAAAGGTCAACAACTTAATACTCCTTAATCCACCTGTATGTCTATTTTACTCATCAAATTATCCTTTTATTACTGAATTCATTCTGCAT TTGACATCATCCATTGAATATAGAAGTTTAAATGAGTGTTATACAACTTTGGTTTTCTTTATATGCCGAAAAAATCACATCTTTTGGATGTAAAGAATTT TCTATAAACAAAAAATGTGAATAGGTTTTAGCATGTATTGTTCTGTTAACTGATCTACCTTATGTTTTTCACTTTATTCTTGTGAGCACTAATATAAATG AAGTAGGGTTTTGTACTAGACAAGCCATTCTATCCATCTGTTACATCATTCTTTTCATGTGTATATGAATTTTAGGATTATAATTCTCCTGTGATTGATT TATAGCATGGCAGGTGAATAATATTGAGCATAATATAATTCAATAATGTCGGGTTTAGTCAAATGTGAACTCCAGCATTGAATACGAGGGATGAGTAGTT TATAAGTGGAAAAGGCTCATGAAATCATTGCCTTAGGCTTTTGGTTCAAGATGTGTTATCTCACTTGTACCTCTTCACTCTTCCCATACCACGTAACAAT GAGACTCCTCGGTCGTTGGAGCCTTGGAGGCTCCCTGGTTGCAGTCGGATCCAACTGTCAAATATCAATTTACGAATAATTTCCTTTTGTCGACTCCTTC TTTTCCAAGTTATGATGAGTAGAGTGGAAAATGAGAGAAAATCTAGCTCTAGAATAGAGTTATAGATGACAAAGACAAATACAAAGGTTGTAGGTTTAAG AAATGTGTAAATTGCTGCAATGCTATACTGCAATTTATACTTAACAAAATTTAATGACTCAATTAGAAGTTTCCTAAATACTTTCTAACAGTTACTAACT TCAACTCACCTTCCTTGTTTTATAAGTTAACAGCCCGACATGCTGAGCTTCCGTCGACGTTGTCTATTTTCAGCAATTTTTTGCTGGGTGAAATATTTTC ACAGGATCCATTGAGGGCAAGTGACAAAGCTCTTACAAGCTGTGGCCCCTATAAAATGAAAGAAGAAGATGCAATGGTGTATAGAAGACCTTATCTCACT TCTGGTTCCTCCGGATTTGCACTAAATGCCCTTAGCAGGACTATGAAGAAAGACCTGAAGAGATATGTGAAGGATATGCAGAGTATACTAAGGGACAAAA ATTGGAAAGTTAGAACTGCAATATGTTGGGGTCAAAGAGACCGGTGGTTGAGCTATGATGGAGTGGAAGATTTCTGCAAAGATTCCAACCATGCACTTAT TGAACTTCCAAAGGCAGGTCATCATGTTCAAGAAGATTGTGGTGAAGAAATTGGTCAACTAATTTATGAGATAATAAGTAGAAGAAAATAGATACTAGGA TATTTTCTAATTATTATGATGATCCAATATAATTTTTTGACATGATGGTACATGAGATTGGATGTTATATACAAAACTTTTATATTAAAATCAAATCATT TATATGTCATCTTTATTGTTT
• Tissue: pods
• Gene name: LI_gene_156559;
• Additional information: details;

Expression of Ll_transcript_423895

FPKM

• PAB: 7.1
• PNAB: 1.4
• PS1: 1.9
• PS2: 0.2
• PS3: 0.5
• PW1: 1.1
• PW2: 2.9
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_423895

• Blastp: Haloalkane dehalogenase from Caulobacter with 34.68% of identity
• Blastx: Haloalkane dehalogenase from Caulobacter with 34.68% of identity
• Eggnog: Alpha beta hydrolase(COG0596)
• Kegg: Link to kegg annotations (Caul_2671)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449437.1)
• Pfam: alpha/beta hydrolase fold (PF00561.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;