Ll_transcript_423390

• Id Trinity: TRINITY_DN47925_c0_g2_i2
• Name Transcript: Ll_transcript_423390
• Sequence: TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCCATAATTTGGATCCAACATCCAATTCAGCAAATATGCTATGTTCTTC AACCCTTTACCCTTTGCAATTAAAATCTTCATTGCATTCCATTAACCCACACCCTCTTCAATTCAAACACTCTTTCTTTTCTCTCTCCTCCAACAATAAC TCCAATCTCTCTTCCCCCAAACCCCTTCGCATTCGCGCCATTGATGCAGCTCAAAGCTTCGACCATGAATCCAAACTCGCCATACAGTTTCACAATTCCC AGAGACTCAAAATCGCCATTGTTGGCTTCGGCAACTTCGGCCAGTTCCTCGCCGCCACCCTCATCCGTCAGGGCCACACCGTCCTCGCCCACTCCCGCTC CGACTACTCCACCGCCGCTCGCGAAATGGGTATCACCTTTTTTCAAAACCCTGATGACCTATGTGAAGAACACCCAGAAGTGATTCTTCTATGTTCATCA ATAATTTCGACCCAAAAAGTTCTCCTTTCTCTCCCGTTTCAGCGATTGAAGCGCAGCACATTGTTCGTCGATGTTCTCTCTGTAAAAGAATTCCCAAAGA ATCTATTGCTTGAAGTGTTGCCTGATTATTTTGACATCATTTGTTCACACCCCATGTTTGGACCTGAGAGTGGGAGGCATGGTTGGCATGGTCTCAACTT TATGTATGAGAAAGTTCGAATCTTGGATGAGGATTATAGAGTAGCTAGGTGTAGAAAGTTTCTGAATGTGTTTGCTAGAGAAGGGTGTAGAATGATTGAG ATGAGTTGCGGCGACCATGATATATATGCTGCCGGGTCGCAGTTTATAACTCACACTGTTGGGAGGGTTTTGGAAGGGTTGAATTTGGAGTCAACTCCTA TTAATACTAAGGGGTATGAGAGTTTGTTGGATTTGGTGGAAAATACTGCTGGAGATAGTTTTGATCTCTATTATGGTCTTTTTATGTTTAATAAGAATTC TTTGGAGATGTTGGAGAAGTTGAACTTCGCTTTTGAGGACTTGAGGACAGAACTCATTGGGAGGTTGCATCATGTTGTAAGGGACCAATTGTTTGAAAAT GCTGGAAAATCGCGAAGTGTGCAAGATAACAACTATGCTTTGTCGAAGTACTATCTGAATGGATCTGCCCACATATTACCCCCCAAAGATGATAGATTCC ATGATGTTGCTCAACTAAATAAGTCAAACAATTCCAGCCAGTCTAATGAGAACTCAAAGCTCAAGATTGCGATCATTGGCTTTGGCAACTTCGGTCAATT CCTTGCAAAAACCTTTATTCATCTCGGTCATGAAGTGCTAGCATACTCTCGATCTGACTACTCTGCCATGGCTCGGAAATTGAGAGTTTCTTATTTCAGT GATGCAGATGATCTTTGTGAACAGCATCCAGAGGTGATTTTACTTTGCACTTCCATCCTTTCCACTGAGAAGGTTCTTAAATCATTGCCAGTGCAAAGAC TGAAGAGAAGCACTTTGTTTGTTGATGTACTTTCTGTCAAAGAATTTCCTAGAAACTTGTTTCTTCAACATTTACCACCTTATTTTGATATTCTCTGTAC TCATCCTATGTTTGGGCCAGAGAGTGGAAAAAATGGGTGGAAGGGTCTTCCTTTTGTTTTTGATAAAGTCAGAGTCGTAAGAGATGAATCAAGAATATCA CGGTGTGATCAGTTTCTTAACATTTTTGCTACCGAAGGGTGCCAAATGGTTGAAATGCCATGTGCTGAACATGATTGGCATGCAGCTGGATCTCAGTTCA TTACACACACCACAGGAAGAATTTTAGAACGGCTGAAGTTGGAAGCAACACCAATCAACACCAAGGGCTATGAAACTTTGTTGAGTTTGATGGATAATAC AGTTGGAGATAGTTTTGATCTGTACTATGGTTTGTTCTTGTATAACTTAAATGCCATGGAGCAGCTTGAAAGATTGGATCAGGCTTTTGAATCACTGAAG AAACAGCTTTTTGGCCGTTTGCATAGAGTTTACCGAAAGCAAGTATTTGAAAATGAAGAACTTGTCCATGCTTTGCCGGAGAGGTCTTTTTTGCAAGAGA TATCTGAAGATAGTAATGCTGTATCTTCTCTCACAGATACTGTGGACCCTAAATGAAGTTAGTTTCAAAGTATTCTTGCAAAAACATGGCAAGATGTATG AGCATTCAGCCAAGTAATCCACCTGATGCTGGTCAATGTTGGTCCTCATAGTGCTGATTGGTGCTTTTATTTCATCCAGCTGTACATTACAGGATGAGAA AAAGATGTATGCACTGACAGTGTATGAGTTTTATACACTGTCATTACATTATCAC
• Tissue: pods
• Gene name: LI_gene_156666;
• Additional information: details;

Expression of Ll_transcript_423390

FPKM

• PAB: 2
• PNAB: 3.3
• PS1: 4.1
• PS2: 2.5
• PS3: 5.7
• PW1: 2.2
• PW2: 2
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_423390

• Blastp: Arogenate dehydrogenase 1, chloroplastic from Arabidopsis with 66.95% of identity
• Blastx: Arogenate dehydrogenase 1, chloroplastic from Arabidopsis with 67.48% of identity
• Eggnog: prephenate dehydrogenase(COG0287)
• Kegg: Link to kegg annotations (AT5G34930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463403.1)
• Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;