Ll_transcript_423393

• Id Trinity: TRINITY_DN47925_c0_g2_i3
• Name Transcript: Ll_transcript_423393
• Sequence: TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCCATAATTTGGATCCAACATCCAATTCAGCAAATATGCTATGTTCTTC AACCCTTTACCCTTTGCAATTAAAATCTTCATTGCATTCCATTAACCCACACCCTCTTCAATTCAAACACTCTTTCTTTTCTCTCTCCTCCAACAATAAC TCCAATCTCTCTTCCCCCAAACCCCTTCGCATTCGCGCCATTGATGCAGCTCAAAGCTTCGACCATGAATCCAAACTCGCCATACAGTTTCACAATTCCC AGAGACTCAAAATCGCCATTGTTGGCTTCGGCAACTTCGGCCAGTTCCTCGCCGCCACCCTCATCCGTCAGGGCCACACCGTCCTCGCCCACTCCCGCTC CGACTACTCCACCGCCGCTCGCGAAATGGGTATCACCTTTTTTCAAAACCCTGATGACCTATGTGAAGAACACCCAGAAGTGATTCTTCTATGTTCATCA ATAATTTCGACCCAAAAAGTTCTCCTTTCTCTCCCGTTTCAGCGATTGAAGCGCAGCACATTGTTCGTCGATGTTCTCTCTGTAAAAGAATTCCCAAAGA ATCTATTGCTTGAAGTGTTGCCTGATTATTTTGACATCATTTGTTCACACCCCATGTTTGGACCTGAGAGTGGGAGGCATGGTTGGCATGGTCTCAACTT TATGTATGAGAAAGTTCGAATCTTGGATGAGGATTATAGAGTAGCTAGGTGTAGAAAGTTTCTGAATGTGTTTGCTAGAGAAGGGTGTAGAATGATTGAG ATGAGTTGCGGCGACCATGATATATATGCTGCCGGGTCGCAGTTTATAACTCACACTGTTGGGAGGGTTTTGGAAGGGTTGAATTTGGAGTCAACTCCTA TTAATACTAAGGGGTATGAGAGTTTGTTGGATTTGGTGGAAAATACTGCTGGAGATAGTTTTGATCTCTATTATGGTCTTTTTATGTTTAATAAGAATTC TTTGGAGATGTTGGAGAAGTTGAACTTCGCTTTTGAGGACTTGAGGACAGAACTCATTGGGAGGTTGCATCATGTTGTAAGGGACCAATTGTTTGAAAAT GCTGGAAAATCGCGAAGTGTGCAAGATAACAACTATGCTTTGTCGAAGTACTATCTGAATGGATCTGCCCACATATTACCCCCCAAAGATGATAGATTCC ATGATGTTGCTCAACTAAATAAGTCAAACAATTCCAGCCAGTCTAATGAGAACTCAAAGCTCAAGATTGCGATCATTGGCTTTGGCAACTTCGGTCAATT CCTTGCAAAAACCTTTATTCATCTCGGTCATGAAGTGCTAGCATACTCTCGATCTGACTACTCTGCCATGGCTCGGAAATTGAGAGTTTCTTATTTCAGT GATGCAGATGATCTTTGTGAACAGCATCCAGAGGTGATTTTACTTTGCACTTCCATCCTTTCCACTGAGAAGGTTCTTAAATCATTGCCAGTGCAAAGAC TGAAGAGAAGCACTTTGTTTGTTGATGTACTTTCTGTCAAAGAATTTCCTAGAAACTTGTTTCTTCAACATTTACCACCTTATTTTGATATTCTCTGTAC TCATCCTATGTTTGGGCCAGAGAGTGGAAAAAATGGGTGGAAGGGTCTTCCTTTTGTTTTTGATAAAGTCAGAGTCGTAAGAGATGAATCAAGAATATCA CGGTGTGATCAGTTTCTTAACATTTTTGCTACCGAAGGGTGCCAAATGGTTGAAATGCCATGTGCTGAACATGATTGGCATGCAGCTGGATCTCAGTTCA TTACACACACCACAGGAAGAATTTTAGAACGGCTGAAGTTGGAAGCAACACCAATCAACACCAAGGGCTATGAAACTTTGTTGAGTTTGATGGATAATAC AGTTGGAGATAGTTTTGATCTGTACTATGGTTTGTTCTTGTATAACTTAAATGCCATGGAGCAGCTTGAAAGATTGGATCAGGCTTTTGAATCACTGAAG AAACAGCTTTTTGGCCGTTTGCATAGAGTTTACCGAAAGCAAGTATTTGAAAATGAAGAACTTGTCCATGCTTTGCCGGAGAGGTCTTTTTTGCAAGAGA TATCTGAAGATAGTAATGCTGTATCTTCTCTCACAGATACTGTGGACCCTAAATGAAGTTAGTTTCAAAGGTTTCCATCTTATTGATAAGTATTGCATGC CTTGTTTATTCCATTAGTAGGTTCAAGTGTTCAACTAACTTTTCATTTTTAAAATTTCATGTTCAATCTTTCCAGAAGTTGTGCTGCTCCGCTCGATTAA ATGAAATCAATGATGATTTTGACATGTTTGGATATACATATTTAATACTTCAATCTGTCCCCCCCCCCCCCAAAAAAAAGATTGCCTTCTTTATATGTCT AGCTTGCGGCATTGACACTTGTAGGAACTTACATGTCCTGATATCTGTATTTTATGCCCAATTGTAATAAATGGCATTCGGGGTAGACTTGAGACTTCTG AATCTAAAGTAAGAGAGTTGTTTATGTCATTCAATATTTCAATGAGTGCAACAGAGTTAAGAATATGCAGAATGTTGAAGTTTGATATCTATAGCCTATA TGGATGATTTTGAAATGGAAATATTCACTTAGTTAGTGTGTTTCATCTGAAAACTGGAAAAGATATTTTATACTGGTTTGATCATCTATGTTGATGCTTG ATGTCTTGGTACACAAGATCTTAGAAAATTGAAGCAGGAGACTTGGGAAGGGAAGGGAGGATGGTGAATAGCATTCTTAGAAAGATATAAGGACAAAAGA ATTAATGATAATCTAATCTGATAGATTTGAACTTCCAAAGAGTGGAACATTTGAATTAGTTGGGGTAGATTCCAATGACATCATAATATTTTTGCCATAA ATCATGTTTATTGACAAATATTGATCTATAATTTTTTTCTAATATTTGCCTGTGGCTTTTTTAGTCTCCTCGTGTCTCTAGAAATTGGAATAATCTTCAT TTGATCTACTACTCTCTTTACCAAAGCTTGTAATGGTCTCTTACACACATGCAAGACCACTTAAGTCACCATTCTATCATCTTTTCTACTATAGGAGCTA ACATAACTTTCTCCTCAATCCATTCATTCCTAATTCCTGAATTGTATTTTTTCATCTTTTCTTAATATATTTATCTTTCACCAAAAAAATTATATCTTCA TCTTTGATGTATTTTACTTGATTCTAAGTCTCTAGAAATTTGTATAGCTCATTACACATTCTATTTTTGGTTTGGCTAATTACTTTCTTAATGTTTTGCT TAACTATCTTATTTTGTTGTTGTCAACTTTCAGTATTCTTGCAAAAACATGGCAAGATGTATGAGCATTCAGCCAAGTAATCCACCTGATGCTGGTCAAT GTTGGTCCTCATAGTGCTGATTGGTGCTTTTATTTCATCCAGCTGTACATTACAGGATGAGAAAAAGATGTATGCACTGACAGTGTATGAGTTTTATACA CTGTCATTACATTATCAC
• Tissue: pods
• Gene name: LI_gene_156666;
• Additional information: details;

Expression of Ll_transcript_423393

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.5
• PS2: 0
• PS3: 0.5
• PW1: 0.4
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_423393

• Blastp: Arogenate dehydrogenase 1, chloroplastic from Arabidopsis with 66.95% of identity
• Blastx: Arogenate dehydrogenase 1, chloroplastic from Arabidopsis with 67.48% of identity
• Eggnog: prephenate dehydrogenase(COG0287)
• Kegg: Link to kegg annotations (AT5G34930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463403.1)
• Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (PF02826.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;