| Id Trinity | TRINITY_DN47926_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_422471 |
| Sequence | ACAGTTTTTTGGTCTGAAATATTTGAAGTATGCTTTTGTCATATTTTGCTCAAGGTTGCGTGGACTTTGTATTTATTCTCTTTTTTCTTGGAGTTATTTG CCTACTCTTCTCCTTTGGTTTATTCTTATTTTTGTCGAAAACGAATTCGATGCCTACATCACCCCCTTCTAATTTCATCTTCTTTTTCAGGTATTTGTTA AAGATGTTTGGAAGGAGTATACAGGTTGGCCATTGAATGATATGGAAGGACAATATAAATTTATGGTGAAACATGTGCAGCTATGGAACGTTGCTTTTCA TAGCACTTCTCCTAGATGGATTCACTCTGTTTATTTAGCTGCCATTGCTGCCTACTATGCCAGGGAGGTGGAGGCAGGGTTGATGGAGTACAAGCCTGAT ATTATAATCAGTGTCCACCCCTTGATGCAACATATTCCATTGTGGGTTCTGAAGTGGCAAGGTTTGCAGAAGAAGGTGATTTTTGTCACTGTAATCACAG ACCTTAGTACCTGCCACCCTACTTGGTTTCATCCTTGGGTCAATAGGCTGTACTGCCCTTCTGAGGCGGTGGCTAAGAAAGCCTCACAAGAAGGCGGCCT TGAGGAGACTCAAATCCGCGTTTATGGCTTGCCCATCAGGCCTTCTTTTGCTCGTGCAGTTCTCGTGAAGGATCAATTAAGAGAAGAACTTGAGATGGAC CCGGACTTGCCAGCAGTTTTGCTGATGGGTGGTGGTGAAGGAATGGGACCTGTCAAAAAAACTGCAAAGGCTCTTGGAGAAGTACTTTTTGATAAAGAAA CTGAAAAACCAATTGGGCAGATAGTAATTATATGTGGCCGTAATAAGAGCTTAGTATCTACTCTTGAATCTCTTGAGTGGAAGGTACCAGTAAAGGTTAG AGGATTTGAGACCATTATGGCCAAATGGATGGGAGCCTGTGACTGCATCATAACAAAAGCTGGACCAGGTACAATTGCAGAAGCATTGATCAGAGGGCTT CCCATAATCCTTAATGACTATATCCCAGGACAGGAAAAGGGAAATGTACCTTATGTGGTAGACAATGGAGCTGGTGTCTTCACCCGGAGTTCAAAAGAAA CAGCAAAAATCGTGGCCGAATGGTTTAGCACAAAATCAGAAGACCGGAAAAGAATGTCAGAGAATGCACTGAAATTAGCACAACCCGAAGCCGTGTTCGA CATCGTGAGGGACATTCACGAGCTCGCTCTGCAACGCGAGCCATCAAACTTTCCGTACATGTTGACCGCATCCTTTACTAGCCTAATCTAACTTACTAAT TAACTTCCCATCTTTCAGATTAGCCTGTTTTTTCCATCAGGATTGACATGTACAGTTCACTACTAAGAGCACATTATTTTTTATCCCAGTGACTCAATTT TACCATAGTAAGGCACATATCATGGTAAACAAGTTCCGGATTTTTAAAGGCATGGTCATGAAATTTGTATAGGATGTTCATGGGGAAGACTAGATGTTAT TGTCTGTAACAGTGTCACTGCAAGGTTGTTTAACTTCCATATAATCAGTCTAATGGTTTTTTCTTCAATATTTTTCCTTGGAATTGTTCTTACTTGTTAT TACACAGCATAGTACTATTACCATTGCTGTCATTTAGGTTGCTTAAAGATGAGAAGGAGTGTAAAACATAAGCTGATAATGCACATAGTCTTACCTATGG TGCTGGAACATTGAAACTTGAAAGCATGACAAAAGTAATGCAATTTCCTTATGCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_156672; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_422471
| Blastp | Probable monogalactosyldiacylglycerol synthase 3, chloroplastic from Oryza sativa with 78.92% of identity |
|---|---|
| Blastx | Monogalactosyldiacylglycerol synthase 2, chloroplastic from Arabidopsis with 78.86% of identity |
| Eggnog | Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (By similarity)(COG0707) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440827.1) |
| Pfam | Monogalactosyldiacylglycerol (MGDG) synthase (PF06925.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |