Ll_transcript_422480

• Id Trinity: TRINITY_DN47926_c0_g1_i7
• Name Transcript: Ll_transcript_422480
• Sequence: TATTATAGCAACAAGTCTCTGCAAAAACCACTCTTCATCCTTCACCTTTCCCACCATTCATTTTTCATTCCATTCATCAACCACCACCACCACCACCCTA GGTGACAACTGGGGTGCCTTGTTTCTCAAGAAAGGTCACTTTTTTTTTCTTCTTCTTGTTCTTTACTGTGGTGGGTCATGGAGGTTTCGGTTCCATCACC GAATAAGTCGTTTGTGGAGAAGGTTTTTGGAGGGTACCAATACGGGAGTAGTAGCCAGAAGAAGAATAATGGGAATGAGGCTAATAAAAGCCATGATGAG GATAGTGATGGAGGCATGGAGTTGATGGAGATTGGAGCTGAAAGGACCAAGAACGTTTTGATTCTTATGAGTGATACTGGTGGTGGACATAGAGCTTCTG CTGAGGCTATCCGTGATGCTTTTCAAATTGAATTTGGTGATGAATACAGGGTATTTGTTAAAGATGTTTGGAAGGAGTATACAGGTTGGCCATTGAATGA TATGGAAGGACAATATAAATTTATGGTGAAACATGTGCAGCTATGGAACGTTGCTTTTCATAGCACTTCTCCTAGATGGATTCACTCTGTTTATTTAGCT GCCATTGCTGCCTACTATGCCAGGGAGGTGGAGGCAGGGTTGATGGAGTACAAGCCTGATATTATAATCAGTGTCCACCCCTTGATGCAACATATTCCAT TGTGGGTTCTGAAGTGGCAAGGTTTGCAGAAGAAGGTGATTTTTGTCACTGTAATCACAGACCTTAGTACCTGCCACCCTACTTGGTTTCATCCTTGGGT CAATAGGCTGTACTGCCCTTCTGAGGCGGTGGCTAAGAAAGCCTCACAAGAAGGCGGCCTTGAGGAGACTCAAATCCGCGTTTATGGCTTGCCCATCAGG CCTTCTTTTGCTCGTGCAGTTCTCGTGAAGGATCAATTAAGAGAAGAACTTGAGATGGACCCGGACTTGCCAGCAGTTTTGCTGATGGGTGGTGGTGAAG GAATGGGACCTGTCAAAAAAACTGCAAAGGCTCTTGGAGAAGTACTTTTTGATAAAGAAACTGAAAAACCAATTGGGCAGATAGTAATTATATGTGGCCG TAATAAGAGCTTAGTATCTACTCTTGAATCTCTTGAGTGGAAGGTACCAGTAAAGGTTAGAGGATTTGAGACCATTATGGCCAAATGGATGGGAGCCTGT GACTGCATCATAACAAAAGTAAGTTAACTAAACCAATTTGTGCTTTATGTGCTACTTCATCATATGTTAGCAATTAGCATAGACTCATTGGTTGCATGAA ATTTTCAGGCTGGACCAGGTACAATTGCAGAAGCATTGATCAGAGGGCTTCCCATAATCCTTAATGACTATATCCCAGGACAGGTGAGAGATTAAAATGT TGTGCTCATTGCTATTCGGTCTTGTTTTTTCATTCCACCCCTTATTGATTCTTAGCTGCAATGGTAACTGCAGGAAAAGGGAAATGTACCTTATGTGGTA GACAATGGAGCTGGTGTCTTCACCCGGAGTTCAAAAGAAACAGCAAAAATCGTGGCCGAATGGTTTAGCACAAAATCAGAAGACCGGAAAAGAATGTCAG AGAATGCACTGAAATTAGCACAACCCGAAGCCGTGTTCGACATCGTGAGGGACATTCACGAGCTCGCTCTGCAACGCGAGCCATCAAACTTTCCGTACAT GTTGACCGCATCCTTTACTAGCCTAATCTAACTTACTAATTAACTTCCCATCTTTCAGATTAGCCTGTTTTTTCCATCAGGATTGACATGTACAGTTCAC TACTAAGAGCACATTATTTTTTATCCCAGTGACTCAATTTTACCATAGTAAGGCACATATCATGGTAAACAAGTTCCGGATTTTTAAAGGCATGGTCATG AAATTTGTATAGGATGTTCATGGGGAAGACTAGATGTTATTGTCTGTAACAGTGTCACTGCAAGGTTGTTTAACTTCCATATAATCAGTCTAATGGTTTT TTCTTCAATATTTTTCCTTGGAATTGTTCTTACTTGTTATTACACAGCATAGTACTATTACCATTGCTGTCATTTAGGTTGCTTAAAGATGAGAAGGAGT GTAAAACATAAGCTGATAATGCACATAGTCTTACCTATGGTGCTGGAACATTGAAACTTGAAAGCATGACAAAAGTAATGCAATTTCCTTATGCG
• Tissue: pods
• Gene name: LI_gene_156672;
• Additional information: details;

Expression of Ll_transcript_422480

FPKM

• PAB: 0.5
• PNAB: 0.2
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422480

• Blastp: Monogalactosyldiacylglycerol synthase 2, chloroplastic from Arabidopsis with 81.82% of identity
• Blastx: Monogalactosyldiacylglycerol synthase 2, chloroplastic from Arabidopsis with 69.73% of identity
• Eggnog: Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (By similarity)(COG0707)
• Kegg: Link to kegg annotations (AT5G20410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440827.1)
• Pfam: Monogalactosyldiacylglycerol (MGDG) synthase (PF06925.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;