Id Trinity | TRINITY_DN47929_c0_g1_i1 |
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Name Transcript | Ll_transcript_423701 |
Sequence | CTGAAATCAGTGTATTGCACTGTGAAAACATCAAATACCATAACTTTTTCATTTAATGCATTCACCTACCTACACCTTCTCTTATTCAGAGGTACCAGTT TTGTTTTATTTAATGCACTTTCTCTCTTTCACTTTCTCTTTGTTCTTCTTTGCAAAACAAAACACCTTCATCAAACAATTCTTCACCCAAATATATCATC AACCTTCAAACATAGCTGCAGTTTTCACAAAAAATGTACTAACACCATAGCTGCAGTTTTTTTTTATCAAGTGAAGTCCATTTTTTGATTCTGGAATTGT TCAAAACATTGGAATGGAGCTAGTTTTTCTTCTTGGTAAGTTCATTTCCCTTTGGAATTTTCTCTTGTAAGCATTCAAAGTGAATGGATATGATCCAGTG AAGTTTCTGCCTTGCCTATGAATTCCCTGAGTCATTCTGATTTGGCTATTTAATTTGCATACCCACCAGTTTTTTGGGCCTCTTCAACCTGCATTGCTAG ATTATCCATGAAAGTTGTGAAATTTCATGAGATCATGTTGTTTTGGCTCATTAGATGAATTTTGTAAGGGTTGCACTCATCTCTAAACTGCACTCTCAGC TGGGTTTCTTGTTGAATAGTCAATAATCTTTACCAACATTACTAGTAAAAATTCTAGCTTTTTGTACATGAGATGATTTTTTAGTGGCTCATTATCATGG GGTTCCCGGTTAGACATTTCTCAATCTATGTTTTGAATTTGAACCCATGGGGTTTTGTTTTTCAACTTGTGGTTTTATCATACTTATGGTCTTCAGTTTC AAGTCTTGGTTCCATGTCTCCAATGGCTACCTCTTATGGTGACCAAGGTTCTGTCATTTGTGTCTTGAAATCGGACGGGTCTCATACTGTGAGCTGTTAC GGAAAAAACTCGGCCATAATTTATGGAACACAACCTCATTTACAATTCCTTGGCCTAACTGCTGGTGATGGCTTTGTCTGTGGGCTTCTGATGAGTTCTA ATCAACCCTACTGTTGGGGTAGCAGTAGCCACATTCAGATGGGTGTGCCTCAACCTATGATCAAAGGAGCTGAGTACCTAGAAATCAGTGCTGGTGATTA TCATGTTTGTGGATTGAGGAAACCCTTGAAGGGAAGGAACAGGAACACTTCTTTTGTTGATTGTTGGGGCTACAAGATGACCAAGAACTATGTGTTTGAT GGACAGATTCAAACAATTTCATCTGGCGCCGAATTCAATTGCGGCTTGTTTTCACAGAATAGGACTATTTTCTGCTGGAGTGATGAGCCAGATAACAAGG ATATTATTAGTAAGGTTCCTAAATACAACAGATTCCAGAAGATTGCCTGTGGTGGATTGCATGTATGTGGGATCTTAGAAGGGGTGAATGCTAAAACTCT TTGTTGGGGAAGGGACTTGAATATGGAGGAAGAAATTTCGTTGGTACATTCAGGACAAGGGCAAGGTGATATTGCTTTGGTTCCTAATGTTTCCATGCTC TCTGTAGTTGGAGGAAAGTTTCATGCTTGTGGCGTTAAGAGCTATGATCATCGAGTCATTTGTTGGGGCTGTAGTTTGAGAGGAAGCACTCCACCTCCTA GTGAGATTAAGGTGTTTGAGCTTGCTGCTGGGAACTACTTCACCTGTGGAATAATTGCCGAGAAATCTCTTCGAACGGTTTGTTGGGGTACTAATTTCCC TACCTCTCTTCCAATTGCTGCCTCGCCAAGAATGTGTAGGTCTACTCCATGTCCTCCAGATTACTATGAAATGGATCAGGAAAAGGGTCTTTGCAATTCA CCAGAGTCTCATCTTTGCATGCCTTGCAGCAGTGATTGTCCGTCCGAAATGTATCGAAAAAGTAAATGCACCATGACTTCTGATAGAGTATGTGAATATA ATTGTACTGCTTGTTCCTCACCTGCATGCTTCTCCAATTGCTCAGTTTTATATACCAATCCTGTTCCTGCTGCTGATTTGAAGAAGAAAAATGAACGGAT TTGGTCTCAGCAGTTGCCGACTATTGTTGCTGAGATAGCTTTTGTACTTTTCATAGTTTGTGTTGTATCTATATCGGCGGTTTTGTATGTTAGATACAGG CTAAGAAAATGTAAGTGTTTGGCAACAACAAGGCCAAAGGAGAAGAGTACTTCACTTCAAAATGAGAACAGCAAGATAAGGCCAGACATGGAGGAGTTAA AGATTAGGAGGGCACAGATGTTCACATATGAGGAACTCGAAAGTGCAACCGGTGGATTCAAAGAAGAATCCATAGTTGGGAAGGGAAGTTTCTCTTGTGT GTTCAAGGGAGTTTTGAAAGATGGCACTGTTGTTGCTGTTAAAAGGGCGATAATGTCTCCCTCTCCCAACATGCCGAAAAACTCGAAAGAGTTCCACACT GAGCTTGATTTACTCTCAAGGTTGAACCATGCTCACTTGCTTAACCTACTAGGCTATTGTGAAGAAGGTGGAGAAAGACTCCTAGTTTATGAGTACATGG CTCATGGATCCTTGCATCAATACCTTCATGGCAAAAACAAGGAGTTGAAAGAGCAATTGGATTGGATCAGGAGGGTAACAATTGCAGTCCAAGCAGCTCG CGGAATCGAATACTTGCACGGCTATGCATGTCCACCAGTGATTCACAGAGACATAAAATCTTCGAACATTCTCATTGATGAAGAACACAATGCAAGAGTT GCTGATTTCGGCTTATCATTGCTTGGTCCTGCAGATAGTAGCTCTCCACTTGCAGAACTACCAGCTGGTACTCTTGGTTACCTCGACCCCGAATACTATA GGCTTCATTATCTAACAACAAAATCCGATGTATACAGCTTCGGCGTCCTACTACTGGAAATCCTAAGTGGCCGAAAAGCCATTGACATGCAATATGAAGA AGGAAACATAGTTGAATGGGCAGTACCTTTGATCAAATCCGGAAATATACCTGCAATATTGGATCCAATTCTGAAACCTCCACCTGATATTGAAGCCTTG AAAAGGATTGCAAATGTTGCATGTAAAAGTGTGAGAATGAGAGGAAAAGATAGGCCTTCAATGGGAAAAGTAACAACAGCTTTGGAAAGAGCACTAGCAC AGTTAATGGGTAGTCCTTGCATCGATCAACCAATTTTGCCAACTGAGGTAGTTTTAGGAAGTAACAGACTTCACAAGAAACCATCTCAAAGGTCTTCAAA AGGGTCAGCAAATTCAGAACTTGATGTGCCAGAAAGTGAGGATCAGAGGTTTGAGTTTAGAGCACCATCTTGGATAACTTTTCCAAGTGTTACTTCATCT CAAAGGAGAAAATCTTCAGGCTCAGAAGCTGAAGTTTATGGTAAAAATAATGCTGCAGCAGCATCAGAAGGGAGGAACTTTGGATCAAATGTTGGAGTTA GTGGCTGTGGTGGTGATGTTTTGAGAAGCCTTGAGGAAGAGATAGGTCCTGCTTCTCCAAGAGAGAGGTTGTTCTTGCAGCACAATTTCTAATCATGCAT TGATGTTCATTCACCTTTGAAGAGGAAACCAAGATTTCGATACTTAAAGAACGAAAAAACGGGCTTAAAACCTATAACCTTCAAGTCACAAGACATGCAA CCGTACAATTGCGCCGATGCTATATTGTTGCATCACATGCAACTTTTGTTAGTTGTTTTATTAGAACTTCAACATCTCTGACATTGTTTAGTTTCTATGT CTAGAGATTGTTCTGAAGTAGACTTTCATAATCATCATATAAATGTAACTCTGACATTGATTAGTTTCTATGTCAAGACTCCATAGATTTATTTTTATTC ATGAATGCAACTCTTAACATGAATTAGTTTCTATATCTAGAAAACTTTGCTTCAAAATCTTAGTTTGGATGCAATGTTACAATCAAC BLAST |
Tissue | pods |
Gene name | LI_gene_156694; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423701
Blastp | Serine/threonine-protein kinase-like protein ACR4 from Arabidopsis with 64.82% of identity |
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Blastx | Serine/threonine-protein kinase-like protein ACR4 from Arabidopsis with 65.51% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G59420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448271.1) |
Pfam | TNFR/NGFR cysteine-rich region (PF00020.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |