| Id Trinity | TRINITY_DN47933_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_424121 |
| Sequence | TGTTTTGGGGTTTGGTGTCATTGTTGAATTTGATAGGATATATCCAAGGAGGGTGATAATTTGGATTCTGATAAACTACTTCATCTTCAGTCACTGTGGG CCACATTTTGTCACCTCTTGAAGAAAATAGGGGATGATTCTGACGCATTGCAATCCTTTATTTGGAGATGTTTTCTTCCTTTAGCTAAGGCACTACAGGC ATCTCAACACGCTTTGCTTAATCAGATTACAGAATCTTTCATGGACGTTGTGATTGAAACTCACACCTGGAAAGTTCTCAAAGGAACTTTTGTGCCAATT TTTTTAAGATCAATTGGTCTTTCCATGGGTATGCTTCATAATGGTGATTTGGATTTCTATGAATGGAGTAGCAAATCATTTTTCCAGGGTTCATACGATG TTGCAACGGATCCACTAATAGAGAAGGAATTAGTGCCGTCCTATTCAATTAACTTTTCATTGCCAACATCATGTAGTGTTTTGTGTGTAATTCTGGAAGC TGCTCTCGACTATCTGCAAACAGATCCAATATGTAAATCATCAGAAGAAAAAGGGTGTTTTGCTGATAATTTTGTTAAAACTTTAATATGGGAATTATGT AATATGATTGAACGTATGCTTTTGCAAAGTTCAGAGCACCGGTCTTGTGGAGTTGGTTTTCTTCTTCCTATTGTTCTTAAAGCATTTCCTACCAAAAGCT CATTTGAAGTTTCAATTCGTGGGCAGAAACATGTTTTTTCTTGGGAGCATTTCTTCATCAAAATGTGGAATTGCTGCAGAACACTGCTTTCAACTGGACC TTTAGAGAGAAGAGAGGCATTTAATGTTCTCTCTTTGTATTTACCTTTTTCCTTGTCTACAAAAGAAAGTAAAAATGCTGTTGAAGATTTTGACATCAGA GAAGAAAAAGAGTTCTGGGATGAAATAAGGATGGGGCTGGTTGACAAGGAGAGTTTAGTGAGGAAGCAGAGTCTACATATATTGAAGATGACTCTGAACT TACAAGAAGGAACCAATTCCATGCCTAGCATTTTAAAACAGGAGACCGAGGGAAAGCATTCAGTACCTCTTGGTTTGACAAAGAAGGAGCAGTGGGCCTA CAAGGAAGCCAAATCACTTGGTGTTGGGAAGATTTCGACTTCAGATGACCTAATTTTCGACAACAAACAGTATTGGGACGCATTTGTACTTCTATATGAG ATGCTTGAAGAATATGGTACCCATTTAGTTGAGGCAGCTTGGAATCATCAGGTCTCTCTGTTGCTTCATTTCTCTGGGTCATGTGTTAGAAGCAATATCT GTAAAGTTCATGAAAATCAAGTTGAAATATATGGCGAGACCTTCAGCTGGTTATCTATTTTATGGGAACGAGGCCTTTGTCATGACAATCCTCAAGTAAG GTGCTTGATCATGCAGTCTTTTCTGGACATCAATTGGGACAATTATGGGAACTACATTAACTCGGTGCCTGAAGCCTTTGTTCTTGGTCCATTTCTGCAA GGGCTGAATGATCCAATACACCACAAAGAGTTTGGTGTGAAAGGGGTTTACATGTCAAAAGTGATTGAAGGTGCAGCTCGGTTCCTACACCATTATGCTA ATTTCGTGGATCCAAGGAAACACATTGCATTTTTGTGCAACTTAGCATCTACTGCTAAACATCAACCTTTTGGACGAGCTGGACTTATGGGCCTTGCTGA ATGCATTGCGTCAGCTGCTAATGGCATTGGGAGGGTTATTCTTGCCAGGACGAAATCATTTAAGGGCACTTTTCCAGTGGAACCTGTTTCTGGAGTTGCA AATCCAATGGATAAAAAAGAGTTACTAGATGTTTTTAGATATGTTGTTGAGAGCAGCAAACAACACTTCAATCCTAGTTACCGTCAGCAAGTTTGTGGCA AAATTCTGGAGGCTGCTGTTTCAGTGGTGTGTACATTTGATATTCCTCTTGAGATACTTTTGCTTTTCATTTCAGCATTCCCACGGGAATTTACTGATTA TGGTGGTCAATTAAGGGTGACTGTGCAAAGATGGCTTTCAGGATGTGGTTACAAGGATAGCTGTGCCAATTGCTGTAGTAATGAAATGAAGCTCTGGAAC TGTCTATATGACTTCCCTCATAGCTTTGTCTATAATCATCTTTCCAATGATGCTTCTCTTAATTATGATGATGATGACTTGAGTGCATGGGAGTTTGAAG CAAATAGATGGGCAAGAGTGCTTTTCCTTGCAATCAAGGAAGAACATCCTTTGGAACCCATTTTAATGTTTGTTCAAAAGAATGGCCCTAATATCTTGGA ACAAAACCATGATACAAGATACATCACAGTCAAATTCTTGATTCTCGCCATGAGCTTGATTCTGGAGCTTCATAGAATAAAGGAAAGAGTGGTTGAATCT GGTAATAAAGCTAAAAAAAGTGCATTCCCTGGAATTGTTGATGATCTGAGTCTCATAGGCGGTGTGTCTGAGAAGCTTGTTGATAAATATCTTTATTTAT TGGATGATCTGGTTCAGTTTGCAAACCAGTCTTGTTCCATTTTCTGGTCTGATGTTATTGCAGAGAACACTGCACTGCCAGGTGCAGTGAAAGGAAAGCT TGGAGGCCCTAGTCAACGGAGGCTGTCAATTTCAGCCACCACTGCTGTCTTGCAGGCGATTATGTCAGTGAAGGCAATATCATCAATCTTGACGTTCTGT AAACAAGTTAAAAGTGATGCTCCGTATAACTCTGCTCTGACTTTTTTGTGGCAATTTTTCTGGAGGACTACTAGATCTCCAGCTTCTTGTTCAGAGATCG GAGCAGAAATTTGTCTTGCAGCATATGAAGCTCTAGTTTCTGTTCTGAGGGTTCTAGCATCCACAAACTTCCCTCAATCTTTACATCTCATCGAGGAAAA TGAACAACTGTTATCAGAGACGGATGGCATGCCACAGTTAGATTCTATGTTTGCATCTTTTATTCAAAATATGAATGATCTCCTAGGAACAGGGGTTTTG GCAAGAACTCGAAGGGCTGTTTTGTTGGATATTAAGTGGGCGTGCCTAGAATCTTTGTTGTCAATTCCTTCTTATACTCTCAAGAGTGGATTTCATTTGG TGGAAAATCACACTTTCTTCTCAGATGGCACTCTGAGATGCATTTTCAATGATCTTGTTCAGAGCCTTGAAAATGCCGGGGAAAGTTCTGTTTTGTCCAT GCTGAGATCACTGAGAATGTTAATAGAGCTAGTTGGCAAAGTGATGTCAACTGAGGTCATTTCCCAAAGTCATGTAATAGACACTCAGATGATGTGGAAT TTGGTCCGTTCCTCTTGGATATTGCACATAAGCTGCAAAAAGCGAAGAGTTGCTTCAATCTCTGCTCTTTTATCATCTGTTTTGCATCCTTTGGTTTTTA ATGATGAGCACATGCATCAAACAGACAATGGACCTGGACCCTTGAAATGGTTTATAGAAAATCTTCTCGAAGAAGGCACAAAGAGTCCTCGCACAATTCG TCTTGCAGCATTACATTTAACAGGTTTATGGCTCTTGAATCCTAGGATTATAAAGTTTTATATGAAGGAGCTGAAATTGCTATCCCTCTATGGTTCAGTT GCATTTGATGAGGATTTTGAAGCTGAACTAGCTGACAACAATGATGCAAGACTGGAGGTTTCTGTATTGGCTATGAGCCCTGATTCTGAGCTTACTGAAG CATTTATTAATACAGAGTTGTATGCACGTGTATCAGTTGCTGTTCTATTTCACAAGTTGGCTGATTTGGCTAGTATGGTGGGGTTACCAAATGAAGACGC TAATTGCATAGCAGCACTAGAATCTGGCAAACTGTTCCTGCTAGAGCTTCTTGACTCTGCGGTGAATGATAAAGATCTTGTGAAGGAGTTATACAAAAAG TATAGTGCTATTCACAGACGCAAAATACGTGCTTGGCAAATAATATGTGTCCTGTCACCATTTGTTGACAAAGATATAGTCGAGAAAGTTTTCGATTACT TGTATACATCACTTAATAGAAATAACTTACCTGCTGTTCGTCAATACTTGGAGACATTTGCAATCAACATTTACTTGAAGTTTCCGTCACTCGTTAAAGA ACAATTGGTCCCTATATTGCGGGATTATGACACAAAGCAACAGGCGCTATCTTCATATGTATTCATAGCAGCTAATGTCATTCTCAATTCATCTAAAGAC GTTCAACCTAGGCATTTGGATGAATTGTTTCCTCCTCTAGTTCCACTGTTAACCTCACATCACCACAGCTTGCGGGGTTTTACTCAGTTACTAGTATACC AAATTCTGCTTAAACTATTTCCACTGTTGGATTCTTGCTCTTCTGAGATGTTACCTTTAGAGAAGAGGTGTTTTGTGGATTTGAAAATGTACCTCGAAAA AAATTCTGATTGTGCACGCTTACGTGCATCAATGGTAGGATATCTTGATGCTTATAATCCAAATAGCTCTGCCACCCCTGCTGGAATTTTCGTCAATCGA GTTGAGGAGGTTGATTTTGAATGTGTTCCGACATCACTCATGGAGCAACTTCTCAAATTTCTAAATGATGCTAGAGAAGAGCTGCGGTCTTCAATGGCAA AGGATGTGGTGACTATCAGGAATGAGACTCTAAAATTTAATGGAGATAAGAATTGCAAAGAGAGTTTCTCTGGTGGCATTGAAGGAGCCATGCCTAAAGA TATGCCCTCGGATTTCCAGAAAAAGGTTACTCTCACCAAACATGACAAGGGGGATGCAGAAGCAGAAATCCGTTTTAGAAATGATGAAACCTACAGAAAA ATGGCTGAAATAGAAAGGGATGACCTCCTTCTGGATCAAATGCTGCAGTCAAGAAGATCATCTCTCGATCGACTGAAAGCAAGCCGACAGAATATTATCC TTGTGGCTTCATTGCTTGACCGCATACCCAATCTTGCTGGCTTGGCACGTACATGCGAGGTATTTAGAGCATCGGGGCTGGCTATTGCTGATACAAGTAT CATAAGCGACAAACAGTTCCAACTAATCAGTGTGACAGCTGAAAAGTGGGTTCCCATAACTGAAGTCCCAGTGGATAGCTTGAAGGCGTACTTGCAGAAA AAAAAGAGAGAAGGATTCTCCATCCTGGGTTTGGAACAAACTGCAAATAGTGTACCCCTTGATCAGTATAACTTTCCAAAAAACACGGTTCTGGTTCTTG GCCGAGAGAAGGAAGGTATTCCTGTGGATATAATCCATATTCTTGATGACTGCATTGAAATTCCCCAATTTGGTGTTGTTAGATCTCTCAATGTTCATGT CAGTGGTGCTATTGCTCTCTGGGAGTATACTAGACAACAGAGATCTCAATAGTCCATGATTGAATGAGTAGCCGGTTATATTACAATACAACAGCAACAA CCAAACGTTTATCCCATTAGGTGGGTAGCCGATTATATTACAATACATATAAATAAAATATTTGTTGTATTATTCCCCATGAGAAACTTAGTGGTTAGGA TCATTCTTTATTTAATACAGACACTTCAAAATAGTTGTCTGTCATGGACATGTACCATTATCATACACTTCATGAATAGTGTTATACACAACTATATTTT CAAATTTTGATATTTACCTTCTGAATTTACACCATTGTAAATCAAAATGTTATAATAATTTGATAAATCTTGGTATATTATGTTTACTACTCACGCAACT ACTTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156717; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_424121
| Blastp | Probable methyltransferase TARBP1 from Homo with 55.49% of identity |
|---|---|
| Blastx | Probable methyltransferase TARBP1 from Homo with 48.17% of identity |
| Eggnog | Methyltransferase(COG0566) |
| Kegg | Link to kegg annotations (6894) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421761.1) |
| Pfam | SpoU rRNA Methylase family (PF00588.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |