Ll_transcript_422688

• Id Trinity: TRINITY_DN47934_c0_g1_i21
• Name Transcript: Ll_transcript_422688
• Sequence: AATCAATGATTTTATGATCCATTTTCTTATTTGACATTAAAAAAATATTATTTGATATTTAATGGGGTTCTCGCAGCAGCACCAACACCAAACCATTTTT TTTATGAAAGACATAAGAGAGAGAAAGAAGGGTTGAGTGGTATTCCAACGTCGAAAGCAGAGAACAACAGACACAAAGGTTTCTCCTAAACTGAAGTGCT CTGTTCTGTTCTCTTCTGTTTATATCTTCATCACTCTCTCATGTCATAATTACCCAATTCATACCTATATATAAATCTCCTTTCCTTTGCTTCGGTGTTG TCTTCGAATATTTCAGCAACCAATAACTTCTTTTCATTAATTAAGGAAAAACAAGGTACCTCCATTGTCTGGATAAGTTGGTTAAATGGCTACAGTTTGT TGGCCATATTTCGATCCTGAGTATGAGAACTTCAGCAATAGACTCAACCCTCCAAGGGTCTCTGTGGACAATGCTACTTGCCATGATTGTACACTGATCA AGGTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTTGAGTTCATAATTACTAAAGCTTACATATCTTCTGACGG AGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAGAAGATAACAGATAGTAAAACCATTGACATCATTGAAAAGGCTCTAGGACCAAAG GGTCAGGGCAAAGAAGGAGCGAAGAGTTGGCCAGGCAAACGGGTTGGGGTGCATTCTGTTGGTGATCATACAGCCATTGAGCTTATTGGGAGAGACCGCC CAGGTCTCTTGTCTGAGATTTCAGCTGTCCTTGCCAGCCTTGATTTTAATGTGGTTGCAGCTGAAGTTTGGACTCATAACCAGCGAATAGCATGCGTCCT TCACATCAATGATGCTACAAATCAAGTTGTGGATGATCCAAAAAGATTATCTCTTATCGAGGAGCAGCTAAACAATATCTTGCGTGGGTGTGAAGATGGT GAGAAAGTTGCTAGGACAAGTTTCTCAGTGGGTTTCACTCATATGGACAGGAGGCTCCATCAAATGTTATTTGCTGATCGAGATTACGAAGGTTCTGAAG TAACAACAGAAGTTGACAATCCTCCCCTTTTCAAGCCAAAGATTACAATAGAATGTTGTGAGGAAAAAGGGTATTCAGTGGTTACTGTCCGGTGCAAAGA TCGGGCAAAACTCATGTTTGACATTGTCTGCACTCTTACTGACATGCAATATGTTGTTTTCCATGCCACAATCTCATCAGATGCCCCTTATGCATCCCAG GAATACTTTATCCGGCACATGGATGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTTATCAAATGCATTGAAGCTGCTATTAGAAGAAGAGTAA GCGAGGGTGTGAGCCTAGAGCTGTGTGCAAAGGATAGAGTAGGCTTGCTGTCCGAAGTTACAAGGATTCTAAGAGAAAATGGTTTGACAGTGTGTAGGGC GGGTGTATCCACCAGAGGGGAACAGGCATTGAATGTCTTCTATGTGAGGGATGCTTCAGGAAACCCGGTTGACATGAAGATGATCGAAGCGCTTCGTAAA GAAATCGGCAAGACAATGCTGGTGGATGTGAAGAGGGTGCCAGCCAATGCCAAAGCACCAGAAACAAAAGGATGGGCTAAAACTAGCTTCTTCTTTGGTA ACTTGTTGGAGAAGTTCTTGAATTGAGAACCATCATGCAATTGGTGTGGTTGCTTTGTAAAAGACACATCACAATGTATAGAAGAATAAAACTGTTTATG TCTCAGACATGGACAGTGCTTGTACTCTATCACTTGAGTATTAGAACAATGTATGTCACTTATATTGTTCCTTCCAAAACTTTCCCATCTTTCATGTATT TTGTTTTAGTTTTCTGGTCCTATTACCCTTTTAATGAATACATGAAGTCTTTCATTTTGTTTCCTTTTTGTCAATGGAACAGTAGAAAGTGAAATTTAGT CTAACATTTTCATATAACAATATCATTAAGGTCTTGTTAAA
• Tissue: pods
• Gene name: LI_gene_156718;
• Additional information: details;

Expression of Ll_transcript_422688

FPKM

• PAB: 11.6
• PNAB: 14.4
• PS1: 37.9
• PS2: 36.3
• PS3: 23.7
• PW1: 9.7
• PW2: 12.3
• PW3: 35.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422688

• Blastp: ACT domain-containing protein ACR3 from Arabidopsis with 73.63% of identity
• Blastx: ACT domain-containing protein ACR3 from Arabidopsis with 73.63% of identity
• Eggnog: ACT domain(ENOG410ZR0Z)
• Kegg: Link to kegg annotations (AT1G76990)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417421.1)
• Pfam: ACT domain (PF01842.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;