| Id Trinity | TRINITY_DN47947_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_423202 |
| Sequence | AAATAATATACATTTTTTCTTGATTGATTTTGCCGTTCAAGCTTTGGCAAAGGTAGTTTGCCAATTAAGGCATAACCGCATAAGTGAGTTCATGAGATTA ACTATCCCATATACTGAAAGGGGCATAATTCTGTTCAATTCTATTCTGATTCTGATTCAGATTTGGGCTCTGAAAATAGATCTTGTTCAAAATCAAATAG GAGTCAAAGCCATTAACTATTACAATGGTCTGCGAAAAGTGTGAGAAGAAATTAGCGAAGGTGATAGTACCAGACAAGTTGAAAGAAGGAGCAAGCAATA CCACTGAAAGTGGTGGCCGCAAGATCAACGAAAACAAAAGGACGAATAGACTGACAAAAACTATCAGGATTTTCGGTTTACAATGAGGGAGGAGAGCCAG TTCCATCCAAAGTACATTAGAGTGGAAAAGGTATTTCAAGAAAAGGTAAAGAGGTTGCAAACGAATATAAGAAGGACAACAAATTTTTCTCAAAAGATGC AAAGGCCAAATTCAAGGAAATCACTCATAAAAGTACACCGATCTTAGAGAAAACTTTCAATTAAGAAGAGGAGGAGTTTGATGGGTTCATGTTCCTAATA ACAAAGTTTGGATGGCGAAAACTTGCACAACCCAATAAAATGTTCTCATTGGATGTGGTCAAGCAGTTTTACGCCAATTCCATTGTTTCGGGAGAGGCAA GGACCAACAGATACACATGGGTCAATGGCAAAAGAGTGTACTATGACAAATACATCATCAATGAGTACCTTGGGAACCCTTGGACTCCTTTCCCGGATAA TGATCATGATTTGTGCACCTTTCAACTCAAAATAAGAGCCTCATCTTCGGGTGAAGGGTAGCACATGATGAAGCCCAAGTGAGAAGAAGTTTGTGTTTGC AAGGGTTGGAGGTCAACCAAAGTGGTCCAGTTTTTCGGTTTTGTATGACTCAAGCATCTCAACTTTGGATAGTCTTTGTATTGTCCAACATTTGGCCTGC TATGCATGTCTCAGATCTTCCTTTGACCAAGGCAAAACTCATTACTTCAATCTATGAGGGTGATTCAATCGACATTGCAACCATTATCTCAGATGCAATC TCTGAATGCATCACAAGGGGAGTTGTTTCTATGGTTTTGCCCTCATTTATTAACGACTTATGTAAGTACCAAGAAGTGTCGGGACCATATGGGGAAGTCA TGGCCCTCAAGATCGAGATGGACACTTACTATGTTCAAAACCATTGCAAGGAAAGAAGTTTGGCACAAGCAAGGGCCGAATTAAAGAAGAGATTTGGAGA TTTGGGCTCCTCTTCCGAACAATCTCTTGGAGGACCAAACCTTCCCACTTTAGAAGCAATTGCACAAGAGCAACAATTTCAAAATCAACAACAAATTGCT TGCTATCGTGGGATCACAAGCATATATAGGAGTTTTCATAGTATATATGGTTCACATCCTAACTTCCAAGGAGGATCTTATGAGGAGTTTATTGCTCACA CTCAATGGCCAGAAGGAAGACCACATGGGCTTGATGAAGAGGATGAAGATTGAGTTAAAGCTTACTCTCGGTTTTCCCTTTTACTTCATTTCATATCATG CTTTCAATTTAATACTCTTGCATAAAATTTATATCTTTACATTTAAAACTTGGTTAGTTCTTTCTTGTTTAACTTTAGTTTTTAATATTGTTGTGTGTTA TATTGCTTTCAAATTAAGCTTACATGCTTCATAAATTTTAAATATGCATCAAACATCTCATTTTAAAAACCAATTTTTTCATTGACCTGAGGACAAGTCA TTCTTTAAAAAGAGGGAACATGGCTTGATGCATATATAAAAATTATGAAGAAACTTATTCATTTTTTTAGGATATACATTTATCTCGAAAGTAGTTGTTT GTCCATAAAACTCAAATTTTCAAAACCAAATTAAAATGGGCTAAACATCAAAAAATGAATAATAAGAAGAATAAAATAATAAAGTTAATAATTAACCGTA CCACTTCTTGCGAAGGGTTGGTCTCAAATAAGTTGTTTATTTTGTAATTTTCTCTTAGAATTGAAGAGGAGAAATGAGTTGGCAAATGAGATGCAAAAAT TCATTTTGTAATCTCATTTGGGACTAAAAGCATTTCATCGTTGGATAGATGACTCATGCTCCTAAACTTTGATTTGGATTATGGTGTAATGTTATTTCTT TTCTTCATTTGTATCATCTTTTAAATTTTAATCATTGAAGTTATTACTTTTGATTCTTTAAAAAGTTTTTAATGCGGTTTTAGCTTGATCACCTAAAACT TGATTCAAAGATCCAAAAAATGCTTCTTCTTAAGGTATTGATAAGTGAACTAAAAAGTATAAACTACACCTTAGTTCACTTGACATATCAAAGCATCTAC TTTAAGCAATTTGTATTCAAGACTAAACAATGTTAATGGAGCCTGAACTAGGGTGTGACAACCTACTTAGATGAGTGACAATTAATTATTGTGTAGTGCA TTATACAAGGTTTGAAAACCATCTTTCCCATACTAGGACACTGTATGGAAGATTTAGACATGATGTTTGAAATTAACCAAAGTATAATACATAACTTGTA TAAAATGTTCAAAGTCATTTAAGTTAAGAAATAATTTTATCTTTCAAATCAAATTGTCTCTTCGAGAATTTGTAATTATTAGTTTATATCGTATTGTTAA TATTCTAAACAAAACCATTAAAACATGTTGATCATTATTTATGCTATAATATGTTTATATGATTAATTTTATTTGTCATGCATGATGTATGCCTTGCTTG GTTGTTAAGTCAAGTTGTTGCTGATGATTAATATGTTTATATGATTAATTTTATGTGAACTTATTGATTGCTTGCAGATGGACTCCTTATGGAAATACTA AGTGCATCATTTGCAAGCAGCAAGTGCACCAGAATGGCAAATACAGCCACACCTGTGCTTACAGTAAAGGTACTATTTCATCTGTCTGAAATGTTTTGCA ATTGCAACCATAATTTCTTCATGTCAGTGGTAGACTAGTTGTAGTATGTTTCTCTTTCAACTACATTACTTAAATCCTGATGTTTGTTGTGTTGCATGAG TTTGTGCAATGTGTGGTGAGCAAGTTCTGGATACCAAGTTTTACAAACAAAGCAATGTGTAGTGGATACTAGTTGGTGTCTTCTGCATAACTGCATTGTC TGTCTATTTAATTGTCTACATCATTGTGTGGCTAACATACTAACTGAAGTTGTAAACAACAGATACAGTGAAGGGTTTTTCTGTTATCTGCCTTTTGTAA TTTACTTATAGAATAAGGTTCATTTCTGATGTTGAACATATCTTTGTCATTTAAATCCCTTTCTCTTGAGCTTTTATGATGTTTGTTCGTTTGTATAGCT GTAATCCTGATTTCTGCATGGATTTTTCCTCACACCTTTCTTCATCCTATAGAGATAGCAAACCTCAAGAACTAAACTCATTTTTTATTGCATATGAAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_156851; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423202
| Blastp | - |
|---|---|
| Blastx | Cysteine-rich PDZ-binding protein from Ictalurus with 81.58% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002487) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016175467.1) |
| Pfam | - |
| Rfam | - |
| GO | - |