| Id Trinity | TRINITY_DN47952_c2_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_423047 |
| Sequence | AAATTGTGGATGATGAATGATTTTAATGGTAAAATAAATTGCTAGGTATTATTTGTGCTAACCGGGGTTGGTGTGTGCTCTCGAAAAACCATATCTTCAT CCAACCTTTAAATTCCGATTCCAATTCCAATTTCTCTATTCTTTCCTTAATTTCACAAACCCTAACACTGTCTTTGTAATCTTCATCACCAACCATGGCT TTCGAAGACGATCCGTATCGCGACGAGGATGGAGAAGCGTTGATGAATTATGACGATTTTCAATCGGATCGCGAGGCATCTCCCGTGCCCAATCAACAAG GCCTAGCTGATGATTTTGAAGAAGAAGACGTTGACAATTTGCACGGCCGCGATCGGTCTCAGACTCCGGTTTACGACAACAATGATTCGAGGGCAAAGCC GAGGAAGAGGCTCATCAAGAAGAGCGATGCAGGGAAACAGCCAGTGGCGCCGGAGCTGTATGATGAAGTAGAGGAGGAGGAGGATAATGCTCCGCGGTTC GCACGGGATGGATCTGAAGAAGGGGATGCGAGGCATAAGAGGAAGAAAGGGAAGGAGGTTGCTAGTGGGAGTGGGAAGAAGGAGAAGAGACATAAGGGGG AGAAGAGATTTGCAGGAAGTAATAGCAGTGGTGGTGGGAAGAGCGCCTCGAAATTCGGGAGTTCGAGGAGAGGGATTTCTGGGAATGGAGGGAGGGATCA TGATGGTGAGGAAGTTAAGGAGATGTGGGATACGATTGCTGGTGGAGATTCTGAGGATGACCATGAGGGTCAGAGGAATTTGGATGATGACAACTTTATA GATGACACCGGAGTGGAACCTGCTTATTATGGTGATGAGGAACCACGTTCTCCTGGCGATGCTCCCCAGGCTGAGGAAGGGGAAGAGGATGATGAAATCA AGAATCTTTTCAAGATGGGTAAGAAAAAGAAGAAGAATGAGAGAAGTCCTGCTGAAATAGCTTTACTAGTTGAGAATGTCATGGCTGAGCTTGAGGTTAC GGCTGAAGAGGATGCTGAACTTAATAGACAGGCGAAGCCTGCGATTAATAAACTCAAGAAATTGCCTCTTCTTACAGAAGTCCTCTCAAAGAAACAACTT CAACTAGAGTTCTTGGATCATGGAGTGCTGACATTATTGAAGAATTGGCTCGAGCCTCTTCCTGATGGAAGCTTACCAAATATAAACATACGCACAGCAA TTTTACAGATTTTGAATGATTTTCCTATTGACCTAGAGCAGTATGATAGAAGAGAGCAGTTGAAGAAGAGCGGTCTTGGGAAGGTAATTATGTTTTTATC GAAGTCTGACGAGGAAATCAATCTAAATAGGAAATTAGCCAAGGACCTGGTTGATAAATGGGTAAGTAATGAATGAATATAGTCCTGTTTCATCATTTAT CTTCCCTCCAAAGCCTTTTGCTTTTCTTCAAGATATACATTGTTCATGCCTGAGAAGAAAACCTGGGTAATTTATTCTGCTGTGTTTGAGCATTATGATA CATTTGTTTGTACTGTTAGCAAAAAATACTGATTCTTTTTAAATTGCTATGCACTTTTTCCTCTTCTCATGACCTTATCCTCTTTTTATCTACAATTAAT TTTCTTCCTTATAGATTCTTTTAATCATATGTCATCTTTGCATTGTGATTCCAGAGCCGTCCTATATTTAATAAGAGCACACGGTTTGAAGACATGAGAA ATGTTGAGGAGGAAAGAGTTCCTTACAGGAGGCCATCAGTTAAAAAGCCAGCAAATAAAGCTGCAGGAATGGAATCTAGAGATGGTGATCTTGATTTGGA TCTTTCACAGCCTAGGTCTGGACAGTCTTCCTCTAGGCAACTCACATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGCCCCCAATCAAAAATT GACCCAGATGAAATTCGAGCACGAGCAAAAGCTGCTGCACAAGATCAGCACCGTATGAAGGTTTGTGCTTTATTTTTTTATGATGCAGTTTTGACATTGA TGATCATTTTAATTGCCTTTTGTGTCTCTTGTTACTATATGATAAGCAAATGACTTTAAACTTAGGGGAGGGATCAAGTTACTCCAAGAGTAAGTCTTTT TAGACTTACTCCTCATCTTAGCCATCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156880; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_423047
| Blastp | Protein IWS1 homolog 1 from Arabidopsis with 62.56% of identity |
|---|---|
| Blastx | Protein IWS1 homolog 1 from Arabidopsis with 59.6% of identity |
| Eggnog | IWS1 homolog (S. cerevisiae)(COG5139) |
| Kegg | Link to kegg annotations (AT1G32130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420976.1) |
| Pfam | TFIIS helical bundle-like domain (PF08711.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |