Ll_transcript_422333

• Id Trinity: TRINITY_DN47957_c3_g2_i2
• Name Transcript: Ll_transcript_422333
• Sequence: ATCAACTCTTCCACTGAGAATAAGATATCTTCAAAAGTTCCATTTTCTATTGCCAATACCCATGGCTCTCTCTAAGCTTCTAGTTGCTTCCATTCTTGCA TCTCTCCTCCTCCTTCATCTTGTTGATGCTGCTCAATCCGTACATTCACAGATGCATGGTTCTCTTCTTCAGCAGATAGATTGCAATGGAGCATGTACTG CAAGGTGCCGTTTATCATCTCGTCCACGTCTTTGTCAAAGAGCTTGTGGTACTTGTTGCAGACGCTGCAACTGTGTTCCACCAGGCACTGCTGGAAACCA AAAACTGTGTCCTTGTTATGCAAGCTTGACCACCCATGGCGGAACACGCAAGTGCCCTTAGACCCATAGTGGCAAACAAGTCGACTATGTATCACATCGT AAATTTTGTGAATATGAAGTCTTGACTTTGGATCAACGGAAGGTGTAACATGTTGATCGACGTACTTAATATCCTTGGTTTATAATATGTTGGTTAATGT TTTCTGAAGAATAGAGTCATATATGGAAAATAAATAAATGTGTTCAGTACGTGCTGAATCATTGATGAGTGTTGGAACTGTATTTACAAAATTAATAATC ATTTTATGAATTTGAGACAGTCACTTTCTTGTCTTTCACTGTATTAGTACTGTGTGCGTTGTTTATATAAATGATAGAAAAAGAATTTT
• Tissue: pods
• Gene name: LI_gene_156931;
• Additional information: details;

Expression of Ll_transcript_422333

FPKM

• PAB: 9.1
• PNAB: 1.8
• PS1: 0.8
• PS2: 0.4
• PS3: 1.4
• PW1: 15.6
• PW2: 25.5
• PW3: 20.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422333

• Blastp: Snakin-2 from Solanum with 63.46% of identity
• Blastx: Snakin-2 from Solanum with 79.69% of identity
• Eggnog: gast1 protein homolog 1(ENOG410YWQ9)
• Kegg: Link to kegg annotations (102582131)
• CantataDB: Link to cantataDB annotations (CNT0001808)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433680.1)
• Pfam: Gibberellin regulated protein (PF02704.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;