| Id Trinity | TRINITY_DN47958_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_422652 |
| Sequence | ACTCAGTCTGGTTAGAGTCTGATGGTTTTTTCTTTGGCTTTTGAAGTGGTGTTAGGCCTTTTGGAGTGTCCCTTCTGGTTGCTGGGTTTGATGATAAGGG ACCACAATTATATCAGGTGGATCCATCAGGTTCATACTTTTCATGGAAAGCTTCAGCTATGGGGAAAAATGTTTCTAATGCAAAGACATTTCTTGAGAAG AGGTATACAGATGATATGGAACTTGATGATGCAGTCCACACAGCAATATTGACACTGAAGGAAGGGTAGGATCATGCCCCCTCATGTTTATGTGCTAGTA AAACCTTACTTAAAGTATCATTTTTTGTTACTACTGTCCTTTAGGCGGCCCAAAAGTCATTTTATTTCATTTTGTAGTTTCCCTTTTGTTTGGCAATTAC TGAAGTCATCTTTCTGAGCCATGAGCTGGCTTAATTGTCAAATGTTTCCAAGCTTCTTACATTGAATTTTTTTTAAAATGAGCATAATAAGTTTCTATTG CCATTTCCAACTTCCAAGCTTCCTACATTTTAAAGCAATGTAAGAATTATTTTTGCCACTTCTGCTGTATATACATTGCTTTATATAAACTTTTAACATA ATTTTTTCCCTTCTAGGCTTCTTTACTAATTAAAATTAAGTTTAGAAGTGGTGATAGGCACTCCCCATTTTTTGCCAATTGTATTGTTCCTTTTATTCTT GTTCACTCTATAGTCTATAGTCTATGCTGTATTTTTTAACCTACCTGGTATTGGTCTTTGGAACATTTCTATTTATCCTATATTTTCCAGATTTGAGGGA CAGATCTCAGGGAAAAATATTGAAATTGGCATTATTGGTGCTGACAAAAAGTTCAGGGTATTAACACCAGCTGAGATTGATGATTACTTGGGTGAAGTAG AGTAATGTGCAATGAAGAAATCCTTTATGTTCCTGAAGTTGGTGTTTGTTTGACAGTTAAATTTAATCAAATTTCGAGAGGGATAGCTTAGATGAAGACT CGCAATGGCACTGGTAAATTTGTGAGCTGATCTTTGTACAAGGCATTCGAAAAGTCCTTTTCTGAATTAATCACTATACCCAAGCAAACCTACCTTGTTT GAATATATGATATGGCATGACTCTATTGAATATCTCTATTCATTTTCTCTCTTCCTTTTATTATTCTGGTTGCTCCTTATCTATATTATTTTAAGTCTTT CTGGTTAAGCTAAATGTGCATCATAATTATTATTGGCTTTGGGGTTAATTTTGTGATTGTTTTTCTTGTCATTGATCAAATTCTGTCATTTTTGCACCCC TTTGGCATTTTGTTACTATGTGAATAAAGTACTGACTCTCTTCAAATAATAACTTCCCAGACAGAATTGAGTATGAACTTATGATGTAGTTAGTATAATC AAATAATGTCCAGAGTGAAATAATCTGGAGATGTTGTACACTTGATAATGGATATGATGTACCTTGGTAATGCTAAAAGCTGTTTGTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156946; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_422652
| Blastp | - |
|---|---|
| Blastx | Proteasome subunit alpha type-2-B from Arabidopsis with 95.38% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XPQ8) |
| Kegg | Link to kegg annotations (AT1G79210) |
| CantataDB | Link to cantataDB annotations (CNT0001192) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443721.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |