Ll_transcript_422653

• Id Trinity: TRINITY_DN47958_c0_g1_i17
• Name Transcript: Ll_transcript_422653
• Sequence: CATAAACTGATCTATTTGTCCCACAAAATTTTCTTACCTTAATCATTCTTCACTGTTCTCTTCTAAACAAATTCGTAAAGGGTTTCCGTAACGTATCATG GGTGATAGTCAGTACTCGTTTTCTCTCACCACATTTAGCCCTTCTGGAAAGCTAGTTCAGATTGAACATGCTTTGACAGCTGTTGGGTCTGGACAAACAT CTCTGGGAATTAAAGCTGCAAATGGAGTTGTTATTGCAACAGAGAAGAAACTGCCATCTATATTGGTTGATGAAGCATCAGTCCAAAAAATTCAGTTATT GACACCAAATATAGGTGTTGTTTATAGTGGCATGGGTCCCGATTTCCGAGTTTTGGTTCGAAAAAGCAGGAAACAAGCTGTGCAGTATCAACAACTATAT CAAGAACCAATCCCTGTTACTCAACTTGTAAGGGAAGTTGCTGCTGTTATGCAGGAATTTACTCAGTCTGGTGGTGTTAGGCCTTTCGGAGTGTCCCTGC TGGTTGCTGGATTTGATGACAAGGGACCACAATTATATCAGGTGGATCCATCAGGTTCATACTTCTCTTGGAAGGCTTCAGCCATGGGGAAAAATGTTTC TAATGCGAAGACATTTCTTGAGAAGAGGTATACCGATGATATGGAGCTTGATGATGCAGTCCACACAGCAATATTGACCCTGAAGGAAGGCTTTGAGGGA CAAATCTCTGGAAAAAACATTGAAATTGGCATAATTGGTGCTGACAAGAAGTTCAGGGTATTGACACCAGCTGAAATTGATGATTATTTGGGTGAAGTAG AGTAATGTGCAATGAAGAAATCCTCTATGTTCGTGAAGTAGAGTAATGTGCAATGAAGAAATCCT
• Tissue: pods
• Gene name: LI_gene_156946;
• Additional information: details;

Expression of Ll_transcript_422653

FPKM

• PAB: 0
• PNAB: 5.1
• PS1: 4.1
• PS2: 2.7
• PS3: 8
• PW1: 2.8
• PW2: 3.2
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_422653

• Blastp: Proteasome subunit alpha type-2-A from Arabidopsis with 93.19% of identity
• Blastx: Proteasome subunit alpha type-2-A from Arabidopsis with 93.19% of identity
• Eggnog: The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XPQ8)
• Kegg: Link to kegg annotations (AT1G16470)
• CantataDB: Link to cantataDB annotations (CNT0001192)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443721.1)
• Pfam: Proteasome subunit A N-terminal signature (PF10584.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;