| Id Trinity | TRINITY_DN47958_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_422642 |
| Sequence | ATTCAGCAAAATCTCACTTCTGATTTCTTCTCTCTACCAATACCATTGTTTTTGCGTTAAGGGTATAATGGGTGATAGTCAATACTCCTTCTCTCTTACC ACATTTAGTCCTTCTGGAAAGCTTGTTCAGATTGAACATGCTTTGACAGCTGTTGGGTCCGGACAAACCTCTCTGGGAATTAAAGCTGCAAATGGAGTTG TTATTGCAACAGAGAAGAAACTACCATCTATTTTGGTTGATGAAGCATCAGTCCAAAAAATTCAGTTGTTAACACCAAATATAGGTGTTGTTTACAGTGG CATGGGTCCCGATTTCAGAGTTTTGGTTCGAAAAAGCAGGAAACAGGCTGTGCAGTATCAGCAACTATATCAAGAACCAATCCCTGTCACTCAACTTGTA AGGGAAGTTGCCGCTGTTATGCAGGAATTTACTCAGTCTGGTGGTGTTAGGCCTTTTGGAGTGTCCCTTCTGGTTGCTGGGTTTGATGATAAGGGACCAC AATTATATCAGGTGGATCCATCAGGTTCATACTTTTCATGGAAAGCTTCAGCTATGGGGAAAAATGTTTCTAATGCAAAGACATTTCTTGAGAAGAGGTA TACAGATGATATGGAACTTGATGATGCAGTCCACACAGCAATATTGACACTGAAGGAAGGGTAGGATCATGCCCCCTCATGTTTATGTGCTAGTAAAACC TTACTTAAAGTATCATTTTTTGTTACTACTGTCCTTTAGGCGGCCCAAAAGTCATTTTATTTCATTTTGTAGTTTCCCTTTTGTTTGGCAATTACTGAAG TCATCTTTCTGAGCCATGAGCTGGCTTAATTGTCAAATGTTTCCAAGCTTCTTACATTGAATTTTTTTTAAAATGAGCATAATAAGTTTCTATTGCCATT TCCAACTTCCAAGCTTCCTACATTTTAAAGCAATGTAAGAATTATTTTTGCCACTTCTGCTGTATATACATTGCTTTATATAAACTTTTAACATAATTTT TTCCCTTCTAGGCTTCTTTACTAATTAAAATTAAGTTTAGAAGTGGTGATAGGCACTCCCCATTTTTTGCCAATTGTATTGTTCCTTTTATTCTTGTTCA CTCTATAGTCTATAGTCTATGCTGTATTTTTTAACCTACCTGGTATTGGTCTTTGGAACATTTCTATTTATCCTATATTTTCCAGATTTGAGGGACAGAT CTCAGGGAAAAATATTGAAATTGGCATTATTGGTGCTGACAAAAAGTTCAGGGTATTAACACCAGCTGAGATTGATGATTACTTGGGTGAAGTAGAGTAA TGTGCAATGAAGAAATCCTTTATGTTCCTGAAGTTGGTGTTTGTTTGACAGTTAAATTTAATCAAATTTCGAGAGGGATAGCTTAGATGAAGACTCGCAA TGGCACTGGTAAATTTGTGAGCTGATCTTTGTACAAGGCATTCGAAAAGTCCTTTTCTGAATTAATCACTATACCCAAGCAAACCTACCTTGTTTGAATA TATGATATGGCATGACTCTATTGAATATCTCTATTCATTTTCTCTCTTCCTTTTATTATTCTGGTTGCTCCTTATCTATATTATTTTAAGTCTTTCTGGT TAAGCTAAATGTGCATCATAATTATTATTGGCTTTGGGGTTAATTTTGTGATTGTTTTTCTTGTCATTGATCAAATTCTGTCATTTTTGCACCCCTTTGG CATTTTGTTACTATGTGAATAAAGTACTGACTCTCTTCAAATAATAACTTCCCAGACAGAATTGAGTATGAACTTATGATGTAGTTAGTATAATCAAATA ATGTCCAGAGTGAAATAATCTGGAGATGTTGTACACTTGATAATGGATATGATGTACCTTGGTAATGCTAAAAGCTGTTTGTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_156946; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_422642
| Blastp | Proteasome subunit alpha type-2-A from Arabidopsis with 94.44% of identity |
|---|---|
| Blastx | Proteasome subunit alpha type-2-A from Arabidopsis with 94.44% of identity |
| Eggnog | The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity)(ENOG410XPQ8) |
| Kegg | Link to kegg annotations (AT1G16470) |
| CantataDB | Link to cantataDB annotations (CNT0001192) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443721.1) |
| Pfam | Proteasome subunit A N-terminal signature (PF10584.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |